Variovorax paradoxus EPS: Varpa_5789
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Entry
Varpa_5789 CDS
T01392
Name
(GenBank) S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
KO
K07568
S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:
2.4.99.17
]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_5789
Enzymes [BR:
vpe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.17 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Varpa_5789
Transfer RNA biogenesis [BR:
vpe03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Varpa_5789
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Queuosine_synth
DUF5558
DUF6131
Motif
Other DBs
NCBI-ProteinID:
ADU39941
UniProt:
E6UWL1
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All DBs
Position
6296633..6297676
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AA seq
347 aa
AA seq
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MRAFTLSDFDFDLPPELVAQHPASERTSSRLLDGTGDAPVDRIFKDLPSLLREGDLLVFN
DTRVVKARLFGEKPTGGKLELLVERVLQGQEVVAHMKVSKKPPVGTTLEMVGGFRATLLG
RWPEEDGALFRFAFESDAGENPYMLMERCGHVPLPPYITHTDSVDDESRYQTVFARVPGA
VAAPTAALHFDEGLLAALEARGVQRANVTLHVGAGTFQPVKTENIAEHTMHAERYEVPEA
TRRAIAECKARGGRVIAVGTTTVRTLESWAKSGEATGDTRIFITPGFAFAHVDVLVTNFH
LPKSTLMMLVSAFAGYERVMALYANAIAHQYRFFSYGDAMLLARTQD
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccttcacgctttccgatttcgatttcgacctgccgcccgaactggtggcgcaa
catccggcctccgaacgcacgtcttcccgtctcctcgacggcacaggcgacgccccggtc
gaccgcattttcaaggacctgccctcgctgctgcgcgaaggcgacctgctggtcttcaac
gacacgcgcgtggtcaaggcgcgcctgttcggcgaaaagccgaccgggggcaagctcgag
ctgctggtcgagcgcgtgctgcagggccaggaggtggtcgcgcacatgaaggtcagcaag
aagccgccggtgggcacgacgctggaaatggtcggcggctttcgcgccacgctgctgggc
cgctggcccgaggaagacggcgcgctgttccgcttcgccttcgagagcgacgcgggcgag
aacccctacatgctgatggagcgctgcggccacgtgccgctgccgccctacatcacgcac
accgattcggtcgacgacgagagccgctaccagaccgtgttcgcgcgcgtgcccggcgcc
gtggccgcaccgactgccgcgctgcatttcgacgaaggcctgctggctgcgctggaagcg
cgcggtgtgcagcgcgcgaacgtcacgctgcacgttggcgccggcaccttccagccggtg
aagaccgagaacatcgccgagcacacgatgcatgccgagcgctacgaggtgcccgaggcc
acgcggcgcgcgattgccgaatgcaaggcgcgcggcggccgtgtgatcgcggtcggcacg
accaccgtgcgcacgctcgaatcgtgggccaagagcggcgaggccacgggcgacacgcgc
atcttcatcacgccgggcttcgccttcgcgcacgtcgatgtgctggtgaccaacttccat
ttgcccaagagcacgctgatgatgctggtctcggcctttgcgggctacgagcgggtgatg
gcgctgtacgccaacgccatcgcccatcaataccgcttcttcagctacggcgacgccatg
ttgcttgcacggacccaggactga
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