Variovorax paradoxus EPS: Varpa_5790
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Entry
Varpa_5790 CDS
T01392
Name
(GenBank) queuine tRNA-ribosyltransferase
KO
K00773
queuine tRNA-ribosyltransferase [EC:
2.4.2.29
]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_5790
Enzymes [BR:
vpe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.29 tRNA-guanosine34 preQ1 transglycosylase
Varpa_5790
Transfer RNA biogenesis [BR:
vpe03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Varpa_5790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGT
Motif
Other DBs
NCBI-ProteinID:
ADU39942
UniProt:
E6UWL2
LinkDB
All DBs
Position
6297682..6298854
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AA seq
390 aa
AA seq
DB search
MLNFELLKTDPDSHARRATLTLNHGKVQTPIFMPVGTYGTVKGVMPRSLEEMGAQIILGN
TFHLWMRPGLDVMQSFGGLHQFEKWNKPILTDSGGFQVWSLGAMRKISEEGVKFASPVNG
DKLFLTPEVSMQIQTTLNSDIVMQFDECTPYDTKGHITTEAEARTSMELSLRWAKRCQSE
FARLENPNALFGIVQGGMFENLREESLAALVDMDFPGYAIGGVSVGEPKEEMLHIMGHTP
HRLPANKPRYLMGVGTPEDLVQGVADGVDMFDCVMPTRNARNGTMFTRFGDLKMRNARHK
SDPQPVDPSCTCHACAGTSGVSWNDGGREGFSRAYLHHLDRCGEMLGPMLCTIHNLHYYL
NLMTEIRAALDAGTFTEFRARFKAERARGV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacttcgaactcctcaagaccgaccccgacagccacgcgcgccgcgccacgctc
acgctcaaccacggcaaggtgcagacgccgatcttcatgcccgtgggcacctacggcacg
gtcaagggcgtgatgccgcgcagtctggaagagatgggcgcgcagatcatcctgggcaac
accttccacctctggatgcgccccggcctcgacgtgatgcaaagcttcggcgggctgcac
cagttcgagaagtggaacaagcccatcctcaccgactccggcggcttccaggtgtggtcg
ctgggtgcgatgcgcaagatcagcgaagagggcgtgaagttcgcctcgcccgtcaacggc
gacaagctgttcctcacgcccgaggtctcgatgcagatccagaccacgctcaacagcgac
atcgtgatgcagttcgacgagtgcacgccctacgacaccaagggccacatcacgaccgag
gccgaggcgcgtacctcgatggagctgagcctgcgctgggccaagcgctgccagagcgaa
ttcgcgcggctcgagaacccgaacgcgctcttcggcatcgtgcagggcggcatgttcgag
aacctgcgcgaggagtcgctcgcggcgctggtcgacatggacttccccggctacgccatc
ggcggcgtgagcgtgggcgagccgaaggaagaaatgctgcacatcatgggccacacgccg
caccggctgcccgcgaacaagccgcgctacctgatgggcgtgggcacgcccgaagacctg
gtgcagggcgtggccgacggcgtggacatgttcgactgcgtgatgcccacgcgcaacgcg
cgcaacggcaccatgttcacccgcttcggcgacctgaagatgcgcaacgcccgccacaaa
agcgacccgcagccggtggacccgagctgcacctgccatgcctgcgcgggcacgtcaggc
gtgtcgtggaacgacggcgggcgcgaaggcttcagccgcgcctacctgcaccacctggac
cgctgcggcgaaatgctcgggccgatgctgtgcaccatccacaacctgcactactacctg
aacctgatgaccgagattcgcgcggcgctcgacgcgggcacgttcacggaattccgcgca
cggttcaaggccgagcgcgcgcgcggcgtctag
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