KEGG   Variovorax paradoxus EPS: Varpa_5872
Entry
Varpa_5872        CDS       T01392                                 
Name
(GenBank) two component transcriptional regulator, LuxR family
  KO
K11712  two-component system, LuxR family, response regulator DctR
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Varpa_5872
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vpe02022]
    Varpa_5872
Two-component system [BR:vpe02022]
 LuxR family
  DctS-DctR (C4-dicarboxylate transport)
   Varpa_5872
SSDB
Motif
Pfam: Response_reg GerE Sigma70_r4_2 Sigma70_r4 HTH_23
Other DBs
NCBI-ProteinID: ADU40024
UniProt: E6UYP9
LinkDB
Position
complement(6386421..6387047)
AA seq 208 aa
MQPLIDGLIYIVDDDASVREALAWLLRSRRLASEHFGSAEAFEQLLAEGPLPDQPRCLLL
DVRMPGTSGLVLFDRLAERGLLDAMPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSDNAL
VDRIEQALGASLRALEVQRVRHSLAGRIAELTDRERDVMRLVVEGLPNKLIADQLAISVR
TVEVHRARVFEKMEVKSAVELANRLRDL
NT seq 627 nt   +upstreamnt  +downstreamnt
atgcaaccgctgatcgatggactcatctatatcgtcgacgacgatgccagcgtgcgcgag
gcgctggcctggctgctgcgctcgcggcgtctggcgagcgagcatttcggcagcgccgag
gccttcgagcagttgctggccgagggcccgctgcctgatcagccgcgctgcctgctgctc
gatgtgcgcatgcccggcaccagcgggctcgtgctgttcgaccggctcgccgagcgcggc
ctgctggacgcgatgccggtgatctttctcaccggccacgcggacgtgccgacggcggtg
gatgccgtcaagcgcggtgccttcgatttctgcgagaagccgttctcggacaacgcgctg
gtcgatcgcatcgagcaggcgctcggggcgtcgctgcgcgcgctcgaggtgcagcgcgtg
cgccacagcctcgccgggcgcatcgccgaactgacggaccgcgagcgcgacgtgatgcgg
ctcgtggtcgaaggattgccgaacaagctgatcgccgatcagttggccatcagcgtgcgc
acggtggaggtccaccgggcgcgcgtgttcgagaagatggaagtgaagtcggccgtcgaa
ttggcgaaccgacttcgggatctttag

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