Variovorax paradoxus EPS: Varpa_5890
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Entry
Varpa_5890 CDS
T01392
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16091
Fe(3+) dicitrate transport protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5890
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_5890
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GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
Motif
Other DBs
NCBI-ProteinID:
ADU40042
UniProt:
E6UYR7
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Position
6410479..6412641
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AA seq
720 aa
AA seq
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MFPHKRTAIAMALLPLSLQSFAADAEPAADPSKSLDTITVTGDWLASPNETKVLEHAGAR
SIVERRQIQESGASSVRDVLRQIPGVQVQESNGTGGSDISLNVGVRGLTARLSPRSTILL
DGVPLAYAPYGQPQLSLAPLSLGSIETVDVVRGAGSVRYGPQNVGGIINFVTRAIPKQFS
GEVGVGIEGAGHGGGTKTTPTLFVGGTNDKGLGLALLYSGTHGDGFRQSNDHTSIDDLML
KGAYRISNTDDIAISLHHFEGKGRMPGGLTTAQFAANPFQSARPFDEFTGSRTDGSIKYT
HNDGVNKFEMLGYYTDSFRSSYLEQEGTGTNAGKRRLTSSPRNYKTFAIEPRYSRLFDSG
SVVQEVSVGFRYLREQASEVATRTVYYTPSPLENAYNRTQSPFQTSKGGTVAHAFYIDDR
IDFGNWTVTPGVRYESFSSHNDVFTVANNRITTAIYPKIDSNEVLPTLSVLYRASERWSL
FANAGVSFGPQQYAQLAQSTTSLHPEKAKTYEIGTKYKGEAWSGELTLFNINFDKELLLA
RSITGDVGQWTDLGATRHRGLESALRYDLGDLSASLKGLSVSGTYTYTQATSKAGNFAGR
DLPFYSRQILTLGTRYERGPWTFNADIYAQSKQRSPGSPEDGKPYITLEDSNGRFGNIPG
YSTVNLRAAYDFGPSMSNLKLAVGIKNLFDRRYYNRSVDNNGGKYVGQPRTLYLQASVAF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
ttgttcccgcacaaacgcaccgccatcgcgatggccctgttgcccctgagcctgcagagc
ttcgcagccgacgcagaacctgccgccgacccgtcgaagtcgctggacaccatcaccgtc
accggcgactggctcgccagccccaacgaaaccaaggtgctcgagcacgccggtgcgcgc
agcatcgtcgagcgcaggcaaatccaggaaagcggcgcctccagcgtgcgcgacgtgctg
cgccagattccgggcgtgcaggtgcaggagagcaacggcaccggcggcagcgacatctcg
ctgaacgtgggcgtgcgcggcctgaccgcccggctgtcgccgcgctcgaccatcctgctg
gacggcgtgccgctggcctatgcgccctacggccagccgcaactgtcgctggcgccgctg
tcgctcggcagcatcgagacggtcgacgtggtgcgcggcgcgggctcggtgcgctatggc
ccccagaacgtgggcggcatcatcaacttcgtgacgcgcgcgatccccaagcagttctcg
ggtgaagtcggcgtgggcatcgaaggcgccggccacggcggcggcaccaagaccacgccc
acgctgttcgtcgggggcaccaacgacaagggcctgggcctcgcgctcttgtattcgggc
acgcacggcgacggctttcgccagagcaacgaccacaccagcatcgacgacctgatgctc
aagggcgcctaccgcatctcgaacaccgacgacatcgccatttcgctgcaccacttcgaa
ggcaagggccgcatgccgggcgggctgaccaccgcgcaattcgcggcgaacccgttccag
tcggcccgccccttcgacgaattcaccggcagccgcaccgacggctcgatcaagtacacg
cacaacgatggcgtgaacaagttcgagatgctgggctactacaccgactcgttccgcagc
agctacctggagcaggaaggcaccggcaccaacgccggcaagcgccgcctgaccagctcg
ccgcgcaactacaagaccttcgccatcgagccccggtattcgcgcctcttcgattcgggc
agcgtggtgcaggaagtcagcgtcggtttccggtacctgcgcgaacaagcctccgaggtg
gcaacgcgcacggtctactacacgccctcgcctctggaaaacgcctacaaccgcacccag
tcccccttccagaccagcaagggcggcaccgtcgcccacgcgttctacatcgacgaccgc
atcgacttcggcaactggacggtcacgcccggcgtgcgctacgaatccttcagctcgcac
aacgacgtgttcaccgtggcgaacaaccgcatcacgaccgcgatctacccgaagatcgat
tccaacgaagtgctgccgacgctctcggtgctctaccgcgcgagcgagcgctggtcgctg
ttcgcgaatgccggcgtgtcgttcggcccgcagcaatacgcccagctcgcgcagtccacc
accagcttgcatcccgagaaggccaagacctacgaaatcggcacgaagtacaagggcgaa
gcctggagcggcgagctgacgctgttcaacatcaacttcgacaaggagctgctgctggcg
cgctccatcaccggcgacgtcggccagtggaccgacctgggcgccacgcgccaccgcggc
ctggaatcggcgctgcgctacgacctcggcgacctgagcgcatcgctcaagggcctgtcg
gtgtcgggcacgtacacgtacacgcaggccacctccaaggccggcaacttcgccggccgc
gacctgccgttctactcgcgccagatcctgacgctcggcacgcgctacgagcgcgggccg
tggaccttcaatgccgacatctacgcgcagtccaagcagcgctcgccgggctcgccggaa
gacggcaagccgtacatcacgctcgaagattcgaacggccgcttcggcaacatcccgggc
tacagcaccgtgaacctgcgcgcggcctacgacttcggcccgtcgatgagcaacctgaag
ctggccgtcggcatcaagaacctgttcgatcgccgctactacaaccgctcggtggacaac
aacggcggcaagtacgtcggccagccgcgcacgctgtacctgcaggcgtcggtggcgttc
tga
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