Variovorax paradoxus EPS: Varpa_5935
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Entry
Varpa_5935 CDS
T01392
Name
(GenBank) transcriptional regulator, GntR family with aminotransferase domain
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_5935
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Varpa_5935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ADU40087
UniProt:
E6UYW2
LinkDB
All DBs
Position
complement(6455523..6456980)
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AA seq
485 aa
AA seq
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MEPLFELAIRLPGTGSRDLLREVHRQLRDAILDGRLQPGARLPATRALAERLGVSRNTML
AAYDLLLSEGYLLARPGAGTYVADTLPQSRRGRISRSASVRRDPRLVPLNVPGADLAPTL
QPQRARDDFRVGLPDTSAFPFDIWRRLSDRALRRIAREPADYAEPQGQAALREAIAKHVS
FTRAVGCTADDIVVTAGAQQAFGLLARILVVPGRTVVAVEQLFYPSLREAMTAAGAKVVT
VPTDIEGLCVDRLPPEARVICVTPSHQFPTGVAMSPQRRAALLAFARARNAVVIEDDYDS
EFRFAGRPLDALQTLDRAESVCYVGTFSKSLFPALRLGFVVAPPWARAALVRARELADWH
GPVLGQEALAAFIAEGHLARHIRKMRKVYGARRTALLEALAKHTAGRLEVIPSDAGLHLS
AWLRTDTRDHAVVERAAAAGITLPPLSRFALDPQAPDVPNGLAFGYGLIDESQIDGAIRR
LAPLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagccacttttcgaactcgccatccgcctgccgggcaccggctcgcgcgacctgctg
cgcgaggtgcaccggcagctgcgcgacgccatcctcgatggccggctgcagcccggcgcg
cgcttgcccgccacacgagccctcgcggagcggctgggcgtgtcgcgcaacaccatgctc
gcggcgtacgacctgctgctgagcgagggctacctgctcgcgcgccccggcgcaggcacc
tatgtggccgacacgctgccgcagtcgcgccgcggtcgcatttccaggagcgcatccgtg
cgacgcgatccgcgcctggtgccgctgaacgtgccgggcgccgatctcgcgcccacgctg
cagccgcaacgcgcgcgcgacgacttccgcgtcggcttgcccgacaccagcgctttcccg
ttcgatatctggcgccgcctctccgaccgcgcgctgcgccgcatcgcgcgtgagcccgcc
gactacgccgagccgcagggccaggcggcgctgcgcgaggccatcgccaagcacgtgtcg
ttcacccgcgcggtcggctgcacggccgacgacatcgtggtcaccgccggtgcacagcag
gcgttcggattgctcgcgcgcatcctcgtcgtgccggggcgcaccgtggtcgcggtggag
cagcttttctatccgtcgctgcgcgaggccatgacggcagcgggcgcgaaggtggtcacc
gtgccgaccgacatcgaaggcctgtgcgtcgatcggctgccacccgaggcgcgcgtgatc
tgcgtgacgccctcgcaccagttcccgaccggcgtcgcgatgtcgccgcagcgccgcgcg
gcgctgctggcctttgcccgggcgcgcaacgcggtcgtcatcgaggacgactacgacagc
gaattccgcttcgccggccgcccgctcgacgcgctgcagacgctcgaccgcgccgagtcg
gtctgctacgtcggcactttctccaagagcctgttccccgcgctgcgcctgggcttcgtg
gtcgcgccgccgtgggcacgcgcggcgctggtgcgggcgcgcgagctggccgactggcat
gggccggtgctcggccaagaggcgctggccgccttcattgccgaagggcacctcgcgcgc
cacatccgcaagatgcgcaaggtctacggcgcgcggcgcaccgcgctgctcgaggcgttg
gcgaagcacacagcgggacggctcgaggtgatcccgtccgatgcgggcctgcacctgtcg
gcctggctgcgcaccgacacccgcgaccacgccgtggtcgaacgcgccgccgcggcaggc
atcacgctgccgccgctctcgcgctttgccctcgacccgcaggcgcccgatgtacccaac
ggcctcgccttcggctacggcctcatcgacgaatcgcagatcgacggcgcgatccgccgc
ctcgccccgctgctctga
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