Variovorax paradoxus EPS: Varpa_5940
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Entry
Varpa_5940 CDS
T01392
Name
(GenBank) multi antimicrobial extrusion protein MatE
KO
K26937
MATE family, multidrug efflux pump
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5940
Transporters [BR:
vpe02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
Varpa_5940
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ADU40092
UniProt:
E6UYW7
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Position
complement(6460796..6462292)
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AA seq
498 aa
AA seq
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MPITETTGAVERPRFVSGSLLRHVCVMAGTGAIGLIAVFAVDLINLFYISLLGEKETAAA
VGFAGVVGFFHASLCIGLTIGIAAVVSRTVGAGRAVDARRIATSSLVLMTAASVVVGSGT
AFFLHPALHVLGAGGETARLAQRYLAVTVHTLPLLGLGMACSALLRSIGDARRSMTVTLA
AAFVTAVLDPILIFGFGLGLDGAAISAVVSRMVLAGIGLHGVMVKHRMLGRFEAPRLAGD
ARALASVAGPAVLTNLATPVGAAFVTHAIAQFGPSAVAGAATIDRLSPVAFGLVYALSGA
VGPILAQNLGAGQYRRVQEGLRDSLLFMVASVAVAWLVLALGQGVLIRAFSAEGQAAELI
ALFCTWLAASFFFSGGLFVANASFNNLGHPLLSTFFNWGRATLGTIPFAWWGSHHGAAGV
LIGQAVGSSIFGLLAVVVAFRLAAKLARQEPSMKAPALALAPVLDAPVAPTSAHGDAAAL
ATPQPAAVTGPAASAGAP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgccaataaccgaaacgacgggtgccgtcgagcgtccgcgcttcgtttcggggtcgctc
ttgcgccatgtttgcgtgatggccggcaccggtgccatcgggctgatcgcggtgttcgcg
gtcgacctgatcaacctcttctacatctcgctgctcggggagaaagagacggcggcggcg
gtcggtttcgcaggcgtggtggggttctttcatgcgtcgctgtgcatcggcctcaccatc
ggcatcgcggccgtggtgtcgcgcaccgtgggcgccggccgcgcggtggatgcgcgtcgc
atcgccacctcgagcctcgtgttgatgacggccgcgtcggtggtggtgggcagcggcacg
gccttcttcctgcaccctgccctgcacgtgctcggcgccgggggcgagacggcgcggctc
gcgcagcgctacctcgcggtgacggtgcacacgctgccgctgttgggcctgggcatggcg
tgctcggcgctcttgcgctccatcggcgatgcgcgccgctcgatgacggtcacgctcgcg
gcggccttcgtgacggcggtgctcgatccgatcttgatcttcggtttcggcctggggctc
gacggcgctgccatcagcgcggtcgtctcacgcatggtgctcgcgggcatcgggttgcac
ggcgtgatggtgaagcaccggatgctagggcgcttcgaagcgccgcggctggccggcgac
gcgcgtgccctcgcgagcgtcgcagggccggcagtgctgacgaaccttgctacgcccgtg
ggtgccgccttcgtcacgcatgcgatcgcgcagttcggcccatcggcggtggcgggcgcg
gcgaccatcgaccgcttgagccccgtggcgttcgggctcgtctacgcgctgagcggcgcg
gtcgggccgatcctcgcgcagaacctcggcgccggccagtaccgccgcgtgcaggaagga
ttgcgcgacagcttgctcttcatggtggcctcggtcgccgtcgcctggctcgtgctggcg
ttgggacagggcgtgctgatccgcgcgttctcggccgaaggacaggccgccgagctgatc
gcgctgttctgcacctggctcgcggccagcttcttcttttcaggcgggctgttcgtggcg
aacgcgtcgttcaacaacctcgggcatccgctgctgtcgacttttttcaactgggggcgc
gccacgctgggcacgataccgttcgcctggtggggctcgcaccacggtgcggccggtgtg
ctgatcgggcaggccgtgggctcgtcgatcttcggattgctggcggtggtggtggcgttc
cggctggccgcgaaactggcgcggcaggaaccgtcgatgaaggcacctgcacttgcactt
gcaccggtgctcgatgcaccggtggcgccgacctcggcgcatggcgatgctgcggcgctc
gccacgccgcagccggcggcggttactggtcctgcagcgtcagcaggcgcaccttga
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