Variovorax paradoxus EPS: Varpa_5950
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Entry
Varpa_5950 CDS
T01392
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_5950
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_5950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5950
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_5950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ADU40102
UniProt:
E6UZZ3
LinkDB
All DBs
Position
complement(6469322..6470464)
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AA seq
380 aa
AA seq
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MKTKASMVPFIGGIGLVALAVAGQASAQEQVVKIGHSGPLSGPNAFAGKDNENGVRLAIE
ELNAKKLSVGGKTLKFELVSEDDQCDAKTGVSVAQKFVDDGVKFVMGPYCSGVAIPASRI
YSDGGTMVSTVGTNPKVTQGGYKNLYRIIASDNQIGSSMAVYAAKELKVKKVGVIDDRTA
FGQGLAEEFTKEAQKQGLTVVGKEFTTDKAVDFTAILTNMKAKAPEAIFFGGYAPQAAPM
ARQMKQLAVPGKLLGGDTVCSPATGKLGGDAVNDLVYCAQGGSILEKAQSGPAFKEKFKK
RFNADADAYAASYYDQVLFIGESMKKANSIDPDKVGAQLYKDTYKGVAATYSYDDKGNMK
QAPITVFTFKNAAPVPIASY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaaagcaagcatggttccattcatcggcggcatcggcctggtggcactcgcc
gtcgcaggccaggccagcgcgcaggagcaggtcgtgaagatcggccacagcggtcccctc
tcgggtcccaacgcgttcgcgggcaaggacaatgaaaacggcgtgcgcctggccatcgag
gagctcaacgccaagaagctcagcgtcggcggcaagacgctgaagttcgagctggtctcc
gaagacgaccagtgcgacgccaagaccggcgtgagcgtggcgcagaagttcgtggacgac
ggcgtcaagttcgtcatgggcccgtactgctcgggcgtggcgattccggcttcgcgcatc
tacagcgacggcggcaccatggtctcgaccgtgggcaccaacccgaaggtgacgcaaggc
ggctacaagaacctctatcgcatcatcgcgagcgacaaccagatcggctccagcatggcc
gtgtacgcagccaaggagctgaaggtcaagaaggtcggcgtcatcgacgaccgcaccgcc
ttcggccagggcctcgccgaagagttcaccaaggaagcgcagaagcagggcctcaccgtg
gtcggcaaggaattcaccaccgacaaggccgtggacttcaccgccatcctcaccaacatg
aaggccaaggcgcccgaggcgatcttcttcggcggctatgcaccgcaggccgcaccgatg
gctcgccagatgaagcagctcgccgtgcccggcaagctgctgggcggcgacaccgtctgc
agccccgccaccggcaagctcggcggcgatgcggtcaacgacctcgtgtactgcgcgcag
ggcggctcgatcctcgagaaggcgcaaagcggcccggctttcaaggagaagttcaagaag
cgcttcaacgccgatgccgatgcgtacgccgcctcgtactacgaccaggtgctgttcatc
ggcgaatcgatgaagaaggccaactcgatcgaccccgacaaggtgggcgcgcagctctac
aaggacacctacaagggcgtggccgcgacctattcctacgacgacaagggcaacatgaag
caggcgccgatcacggtgttcaccttcaagaacgcagccccggttcccatcgccagctac
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