Variovorax paradoxus EPS: Varpa_5996
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Entry
Varpa_5996 CDS
T01392
Name
(GenBank) Organic solvent tolerance protein
KO
K04744
LPS-assembly protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5996
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_5996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
LptD_N
Motif
Other DBs
NCBI-ProteinID:
ADU40148
UniProt:
E6V039
LinkDB
All DBs
Position
complement(6522003..6524618)
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AA seq
871 aa
AA seq
DB search
MSRRVALRRAGPPLKLAMLSLALFQAHGAFAQSAGSLDGPLTLKRTPLLTEIVPPTERGQ
LPSLVTGDRMSGRPDLETVVEGNATLRRGPVAITADRLEYYQPDDKMKATGNVRVNQSGN
VYEGPELELKLETFEGFFNNVRYRFLANGGHGDAERIDFVDANISVARRATYTTCRREDF
PGWMPAWLLTAATITTDTEENEGVATNARLSFMGISTPPIPSVSFPLSNARKSGLLPPTI
GVDNTNGIEISQPYYWNIAPNRDATITPTIMSKRGLNLGTEFRYLEKDYSGSIRLDLMGA
DRLVGQRYNELRASQLQQLANGEIQAKDLTAPPGSTKRWGIWANHHQDFDAKALGLDSLS
ANININRVSDNDYWRDFTRTPTLAQRQLPNEASLNWSKDDWSGAIRTLRYQTLQYNLSPI
VPSYDRMPQITANYNKYDWHGFDVALNLDYTRFRVNTILSGQPGFDAVQQSQPDGDRAMA
NLAISRPFITPSLFVIPKVQLNTASYNYYLPQTDIPKLTLNGVQYVNGMPYNASSLYFFG
TSSNRTVPTFSLDSGLIFERDASYFGRAFRQTLEPRAYYVYTPYRNQSMLPNYDSAANDF
SFATIYTENAFSGGDRISDTNALTLGVSSRLIDPATGVEAARIGIAQRLRFADQKVVLPG
GLPVTDRASDFLVGGQINWTPKWSTDALVQYNPDTRKSTRAALSARYNPEPYHNLSVAFR
YQAPSAAYQAALLANPNTTATNDGNKSIDVGWQWPLNDLWGDKGKNLGPGKGQGGGRWYA
VGRLNYDLQDKKLTDGVLGFEYDGCCWIGRVVLQRITTGQVTANTRIMFQLEFVGFSSIG
SSPMQALRQNIQRYEPLRQPGEAPSRFTNYD
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagccgacgtgttgccctgcgacgcgccggcccgccgctcaagctggccatgctgtcg
ctggcgctgttccaggcgcacggcgccttcgcgcagtccgctggcagtcttgatggcccg
ctcacgctcaagcgcaccccgctgctcaccgaaatcgtgccgcccaccgagcgcggccag
ttgcccagtctcgtcaccggcgaccggatgtccggccgccccgacctggagaccgtggtc
gaaggcaatgcgacgctgcggcgcgggccggtcgccatcaccgccgaccggctcgagtac
taccagcccgacgacaagatgaaggccacgggcaacgtgcgggtcaaccagtccggcaac
gtgtacgaagggcccgagctggagctcaagctcgagaccttcgagggcttcttcaacaac
gtgcgctatcgcttcctggccaatggcggccacggcgatgcggagcgcatcgatttcgtc
gacgccaacatctcggtcgcgcggcgcgccacctacaccacctgccgccgcgaagacttt
ccaggctggatgccggcgtggctgctgaccgcggccacgatcaccaccgacaccgaagaa
aacgagggcgtggccaccaacgcgcgcctgagcttcatgggcatcagcacgccgccgatc
ccgagcgtgagcttcccgctgtcgaacgcgcgcaagagtggccttttgccgccgaccatc
ggcgtggacaacaccaacggcatcgagatctcgcagccgtactactggaacatcgcgccc
aaccgcgacgccacgatcacgccgacgatcatgagcaagcggggcctcaacctgggcacc
gagttccggtacctggagaaggactacagcggcagcatccgcctggacctgatgggtgcc
gaccgcctggtgggccagcgctacaacgagctgcgcgcctcgcagctgcagcaactggcc
aatggagaaatccaggcgaaagacctgaccgcgccgcccggcagcaccaagcgctggggc
atctgggcgaaccaccaccaggacttcgacgccaaggcgctcggcctggattcgctgtcg
gccaacatcaacatcaaccgcgtcagcgacaacgattactggcgcgatttcacccgcacg
ccgacgctggcgcagcgtcagctgccgaacgaggcctcgctcaactggagcaaggacgac
tggagcggcgcgatccgcacgctgcgctaccagacgctgcagtacaacctgtcgccgatc
gtgccgtcgtacgaccgcatgccgcagatcacggccaactacaacaagtacgactggcac
ggcttcgacgttgcgctgaacctcgactacacgcgctttcgggtcaacaccatcctgagc
ggccagcccggcttcgacgcggtgcagcagtcgcagcccgatggcgaccgcgccatggcg
aacctcgcgatcagccgaccgttcatcacgccgagtttgttcgtcattcccaaggtgcag
ctgaacacggcgtcgtacaactactacctgccgcagacggacattccgaagctcacgctc
aacggcgtgcagtacgtcaacggcatgccctacaacgcgagttcgctgtacttcttcggc
acgtcttccaaccgcaccgtgccgaccttcagcctggacagcggcctgatcttcgagcgt
gacgccagctacttcggccgtgccttccgccagaccctggagccgcgcgcctactacgtc
tacacgccgtaccgcaaccagagcatgctgccgaactacgactcggccgccaacgacttc
agctttgcgaccatctacaccgagaacgcgttctcgggcggcgaccgcatctccgacacc
aacgcgctcacgctgggcgtgagttcgcgcctgatcgaccccgccaccggcgtcgaggcg
gcgcgcatcggcattgcgcagcggctgcgctttgccgaccagaaggtcgtgttgcccggc
ggcttgccggtgaccgaccgggcgagcgacttcctcgttggcggccagatcaactggaca
ccgaagtggagcaccgacgcgctcgtgcagtacaaccccgacacgcgcaagtcgacccgg
gcggcgctcagcgcgcgctacaaccccgagccgtaccacaacctcagcgtggcgttccgc
taccaggcaccgagcgcggcttaccaggccgcattgctggccaacccgaacaccacggca
accaacgacggcaacaagtcgatcgacgtgggctggcagtggccgctgaacgacctgtgg
ggcgacaagggcaagaacctcggccccggcaagggccagggcggtggccgctggtatgca
gtgggccgtctcaactacgacctgcaggacaagaaactcacggacggcgtgctcggcttc
gagtacgacggctgctgctggatcggacgcgtggtgctgcagcgcatcaccaccggccag
gtgacggcgaacacccgcatcatgttccagctcgaattcgtcggcttctccagcatcggc
tccagcccgatgcaggccctgcggcagaacatccagcgctacgaacccctgcgccaacct
ggcgaggcgccgagccgcttcaccaattacgactga
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