Variovorax paradoxus EPS: Varpa_6020
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Entry
Varpa_6020 CDS
T01392
Name
(GenBank) membrane protein insertase, YidC/Oxa1 family domain containing
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
vpe03060
Protein export
vpe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Varpa_6020
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Varpa_6020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_6020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vpe03029
]
Varpa_6020
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpe02044
]
Varpa_6020
Mitochondrial biogenesis [BR:
vpe03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
Varpa_6020
Secretion system [BR:
vpe02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Varpa_6020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
Motif
Other DBs
NCBI-ProteinID:
ADU40172
UniProt:
E6V174
LinkDB
All DBs
Position
complement(6547244..6548935)
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AA seq
563 aa
AA seq
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MNDIRRTILWVIFGFSLVLLWDQWQVFNGNKPTFLPSSKPAAVATAPAGTTPASSNGVPT
ASGTSGNAGAVPTQAAAAAPREQVVVTTDLFKATIDSEGGTVNHLELQKYDEADRTKRVV
LFENGSPATRYVAQTGLLNTVDTGDRFPNHLTPMTPKAGPREMAAGQNTLEVSFESAPVG
GLKYTKTYVFHRGDYAIGVRHEVANVSDQPRDAQLYMQLLRHGTVAAGTMFGTNTFTGPA
AYTNEKKFHKLDFKDIAKGKIEPPPPANDGWIAMVQHYFASAWLLKGDPASEQLRREFRV
KDLGDNLFTVAMVATLPKIAPGTTQTVSSVLFAGPQEEKKLEALAPGLDLVKDYGIFAII
SKPLYWLLIQLHGFLGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINPKIMEMRER
LKDKPQEMQQEMMRIYKTEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRHAPWIGWIT
DLSAPDPWYILPVVMTATSLFQTWLNPTPPDPMQAKLMWIMPLAFSVMFIFFPAGLVLYW
ITNNVLSIAQQWFINKRLGVLGK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatatccgccgcacgatcctgtgggtgatttttgggttctcgctggtgttgctg
tgggaccaatggcaggtcttcaacggcaacaagccgaccttcctgccgtcgagcaagccc
gccgccgtcgccaccgccccggccggcaccacgcctgcctccagcaacggcgtgccgacg
gcatccggcaccagcggcaacgcgggcgccgtgcccacgcaggctgcggccgccgcgccg
cgcgagcaggtcgtcgtgaccaccgacctgttcaaggccacgatcgacagcgaaggcggc
acggtcaaccacctcgagctgcagaagtacgacgaagccgaccgcaccaagcgcgtcgtg
ctgttcgaaaacggctcgcccgccacccgctacgtggcacagaccggcctgctgaacacg
gtcgataccggtgaccgcttccccaaccacctgacgccgatgacgccgaaggccggcccg
cgcgaaatggccgccggccagaacacgctggaagtgagcttcgagagcgcccccgtcggc
ggccttaagtacaccaagacctacgtgttccatcgcggcgactacgccatcggcgtgcgc
cacgaagtcgccaacgtgagcgaccagccgcgcgacgcgcagctctacatgcaactgctg
cgccacggcacggtggctgccggcacgatgttcggcaccaacaccttcaccggtcccgcc
gcgtacaccaacgagaagaagttccataagctcgacttcaaggacatcgccaagggcaag
atcgaaccgccgccgcccgccaacgacggctggatcgcgatggtgcagcactacttcgcg
tcggcctggctgctcaagggcgaccccgccagcgagcaactgcgccgcgaattccgcgtg
aaggacctgggcgacaacctcttcaccgtcgctatggtggccacgctgccgaagatcgcc
ccgggtaccacgcagaccgtgagcagcgtgctgttcgccggtccccaggaagaaaagaag
ctcgaagccctcgccccgggcctggacctggtgaaggactacggcatcttcgcgatcatc
tccaagccgctgtattggctgctgatccagttgcacggcttcctggggaactggggctgg
gcgatcgtggcgctggtggtgctgctgaaggcggccttctattggctcaacgccaaggcc
tacgccagcatggccaagatgaaggccatcaaccccaagatcatggaaatgcgcgagcgg
ctcaaagacaagccgcaagagatgcagcaagagatgatgcggatctacaagaccgagaag
gtcaatccgatgggcggctgcttccccatcgtgatccagatcccggtgttcatcgccctc
tactgggtgctgctgtcgtcggtcgaaatgcgccacgccccgtggatcggctggatcacc
gacctctcggcaccggacccctggtacatcctgccggtcgtgatgaccgccacgtcgctg
ttccagacctggctcaacccgacgccgcccgatccgatgcaagccaagctgatgtggatc
atgccgctcgcgttcagcgtgatgttcatcttcttcccggccggcctggtgctgtactgg
atcacgaacaacgtgctgtcgatcgcgcagcagtggttcattaacaagcggctgggcgtg
ctgggcaagtaa
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