Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_01380
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Entry
M634_01380 CDS
T02761
Name
(GenBank) histidine kinase
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M634_01380
Enzymes [BR:
vpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
M634_01380
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Motif
Pfam:
EAL
HDOD
Motif
Other DBs
NCBI-ProteinID:
AGQ89643
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Position
I:complement(272471..273694)
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AA seq
407 aa
AA seq
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MNTTYVARQPIFNRKRQTLGYELLFRDGESNAYPAHIESNRATYRLIVENFLSLGTNPVI
ASSRCFINFPHQSLVRRLPRSLPKNKIVVEVLETCQPTDDLLDAIRELYREGYLIALDDF
TLTPEWRRFLPYVHIVKLDIMAMGLEKACELVKTHLAKRVKYHFLAERVETAEEFEQAKA
AGFKFFQGYFFSKPLVSQTKYVSPEQVLALQLFREVCAPEPDFDRIESIITQDVALSYKL
LRFVNTQITTLEVEISSFRQALIYLGQDKLKQFVSLVVASYISSNKPRELYNLSLQRAQF
CELMSRYQPFSHLNEQGFMVGLLSILDAMLDLSIEALVKQLPLSDSVQQALLHRKGEYGV
LISLEECYERADWHGVEKLSGQLGLSFDEVKASLSEAVRWSQSVVAV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaacgtatgtcgctcgtcagccgatttttaaccgtaaaagacagacgctgggt
tatgaattgttatttagagatggggaaagcaacgcctatcccgctcatatcgaatcaaac
cgagcgacataccgattaatcgtcgagaactttctatcactgggtactaacccagtgatt
gcgtcttcgcgatgcttcatcaactttcctcatcagagcttggtacgccgtttgcctcgc
agcttgccaaaaaacaaaatcgtcgtagaagtcttagagacttgccaacctaccgatgat
cttctcgatgcaattcgcgagttatatcgagaaggttatttgatcgcgctggatgatttc
accttaacgccggagtggcgtcgcttcttaccttatgtgcacatcgtcaaactcgatatc
atggcgatggggctagaaaaagcgtgtgaactggttaaaacccacctcgccaagcgcgtc
aaatatcactttttagcggaacgcgtcgaaaccgcagaagagtttgagcaagccaaagcg
gcgggttttaaattctttcaaggctacttttttagcaagccattggtgtcgcaaaccaaa
tacgtcagtccggagcaggtgttagcgttacaactgtttcgggaagtctgcgcgccagag
ccggattttgaccgcattgaaagcatcattacgcaagatgtggccttgtcgtacaagtta
ctgcgttttgtaaatacccagatcaccacattagaggtggaaatcagctcgttccgtcag
gcgctgatttaccttggtcaagacaagctgaagcaatttgtctctttggtggtggcgtct
tacatctcaagcaacaaaccgcgtgagttgtacaacctctctttgcaacgtgcccagttc
tgtgagctgatgtcgcgttaccaacctttttctcatcttaatgagcaaggctttatggtc
ggcttattgtcgatcttagatgccatgctcgacttatcgatcgaagctttggtgaagcaa
ctgccgttgagtgattctgtgcagcaagcgttactgcatcgtaagggtgagtacggtgtg
ctgatctcgctagaagaatgctacgagcgagctgattggcatggcgtcgaaaagctctcg
ggtcagttgggcttgtcattcgatgaagtcaaagcctcgttaagtgaagcggttcgctgg
agccaaagcgtcgtcgcggtctaa
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