Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_01740
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Entry
M634_01740 CDS
T02761
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf00071
Fatty acid degradation
vpf00280
Valine, leucine and isoleucine degradation
vpf00310
Lysine degradation
vpf00362
Benzoate degradation
vpf00380
Tryptophan metabolism
vpf00410
beta-Alanine metabolism
vpf00640
Propanoate metabolism
vpf00650
Butanoate metabolism
vpf00907
Pinene, camphor and geraniol degradation
vpf00930
Caprolactam degradation
vpf01100
Metabolic pathways
vpf01110
Biosynthesis of secondary metabolites
vpf01120
Microbial metabolism in diverse environments
vpf01200
Carbon metabolism
vpf01212
Fatty acid metabolism
Module
vpf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
M634_01740 (fadB)
00650 Butanoate metabolism
M634_01740 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
M634_01740 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
M634_01740 (fadB)
00310 Lysine degradation
M634_01740 (fadB)
00380 Tryptophan metabolism
M634_01740 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
M634_01740 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
M634_01740 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
M634_01740 (fadB)
00930 Caprolactam degradation
M634_01740 (fadB)
Enzymes [BR:
vpf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
M634_01740 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
M634_01740 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
M634_01740 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
M634_01740 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF5546
DAO
Motif
Other DBs
NCBI-ProteinID:
AGQ89696
LinkDB
All DBs
Position
I:344837..347008
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQADTLQVKEIQDGIAELSFCSPKSVNKLDLATLESLDKALDALTSHQGLKGLMLTSD
KDAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
IGLLDAVVETDALYESALQTLTSAINEKIDWQARRKQKTSPLALSKLESMMSFTMAKGLV
AQKAGPHYPAPMTAVITIEEGARFARNEALDIERKYFVKLAKSEEAKALVGLFLNDQYIK
GIAKKAAKSASKDTERAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQPSLDLGMTEASKL
LNKRLTQGRIDGFKMAGILASITPSLHYAGIENSDVIVEAVVENPKVKAAVLSEVESHVG
EDTVITSNTSTIPINLLAQSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKVDKVMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPERMGKQGRDAIDALFEANKYGQKNGNGFYSYTIDKKGK
PKKTFTEDILPVLADVCAAKQEFDEQTIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEFVEMAKQHAELGAMYHVPKMLIDMAAKGESFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgacaccctacaggtaaaggaaatacaagatggcatagcagagctg
agcttctgctcccctaaatccgtaaacaagctcgacctagcaacgctagagtctctcgat
aaggctcttgatgcgttgacttcacatcaaggtctaaagggcttaatgctcacttcagat
aaagatgcgttcatcgttggcgcagacatcactgaattcttgggcctcttcgctaaaaca
gacgccgagctcgatcaatggctacaatttgccaatagcatcttcaataaactagaagac
ttacccgttccgacaatctcagtacttaaaggtcacacacttggcggcggctgcgaatgc
gtactggctaccgacatgcgtatcggtgataaaaccaccagcattggcctaccagaaacc
aaactgggcatcatgccaggctttggtggttgtgtgcgtttgccgcgcgttatcggtgca
gatagcgcgatggaaatcatcacgcaaggcaaagcatgtcgtgcagatgaagcattgaag
attggtttattggatgctgtggttgaaactgatgcgttgtatgaatccgcattgcaaaca
ctgacttcagctatcaacgaaaagatcgattggcaagcacgtcgtaaacaaaaaacctcg
ccactggcactcagcaagctagagtcgatgatgagcttcacaatggcaaaaggcctagtg
gcacaaaaagcaggtccacactaccctgcgccaatgactgcagttattacgattgaagaa
ggcgcacgctttgcgcgtaacgaagcactcgacattgaacgcaaatacttcgttaaactc
gcgaaatcagaagaagccaaagctctggttggtctgttcctcaacgaccaatacatcaaa
ggcatcgcgaaaaaagcggcgaaatcagcaagcaaagacactgagcgagcagcggtatta
ggtgcaggcatcatgggtggtggcatcgcttaccaatctgcgctgaaaggcgtgccagta
ttgatgaaagacatcgcccaaccatctctcgatttaggcatgaccgaagcgtctaaactg
ctgaacaaacgccttactcaaggtcgtatcgacggcttcaagatggcgggaattttggca
tcaattaccccaagcctacattacgcaggcatcgaaaactcagatgtgattgttgaagcc
gttgtcgaaaatccaaaagtaaaagcagcggtactgagcgaagtcgaatcgcacgttggt
gaagacaccgtcattacatcaaacacatcgacgattccaatcaacttattggcacaatca
cttaaacgcccagaaaatttctgtggtatgcacttctttaaccctgtgcatcgcatgcct
ttggttgaaatcatccgtggtgagaaaacttctgatgaaaccatcaaccgcgtagtggct
tacgcagcgaaaatgggtaaatccccaatcgtcgtgaacgactgtccgggattcttcgtc
aaccgcgtattattcccgtactttggcggtttcagcatgttgcttcgtgacggtgcagac
ttcactaaagtcgacaaagtcatggaacgcaaatttggctggccgatgggcccggcgtac
ttgcttgatgtggtcggcatcgatactgcgcaccacgcacaagcggtgatggcagaaggt
ttccctgagcgaatgggaaaacaaggtcgtgacgcgattgatgctctattcgaagccaac
aaatacggtcagaagaatggcaacggcttctacagctacaccattgataaaaaaggtaag
cctaagaaaaccttcactgaagatatcttgccagtactggcagacgtctgcgcggctaaa
caagagttcgatgagcaaaccatcatccaacgtatgatgattccgatgatcaacgaagtg
gtgctgtgtctgcaagaaggcattattgcaacccctcaagaagcagacatggcgctggtt
tacggccttggtttccctccattccgcggcggtgtattccgctacctagacagcgtaggt
attgctgaatttgttgaaatggcaaaacagcacgccgaactaggcgcgatgtaccacgtt
ccgaaaatgctgattgatatggcggcgaaaggcgaaagcttctacggcgcgcaacagcaa
ggttctatctaa
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