KEGG   Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_01825
Entry
M634_01825        CDS       T02761                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf03030  DNA replication
vpf03430  Mismatch repair
vpf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M634_01825
   03430 Mismatch repair
    M634_01825
   03440 Homologous recombination
    M634_01825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpf03032]
    M634_01825
   03400 DNA repair and recombination proteins [BR:vpf03400]
    M634_01825
Enzymes [BR:vpf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     M634_01825
DNA replication proteins [BR:vpf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     M634_01825
DNA repair and recombination proteins [BR:vpf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     M634_01825
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AGQ89712
LinkDB
Position
I:complement(364828..365928)
AA seq 366 aa
MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLIKVEENVLSMTATDLEVELVSKVTLE
GDFEAGSITVPSRKFLDICRGLPDDAIITFVLEGDRVQVRSGRSRFSLATLPANDFPNIE
DWQSEVEVSLSQADLRTLIDKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAVS
QTQLGADFAQKQIIVPRKGVQELVKLMDAPEQPVVLQIGSSNVRAEVNNFIFTSKLVDGR
FPDYRRVLPQHTNKTLIASCDELRQAFSRAAILSNEKFRGVRVNLAGSEMRITANNPEQE
EAEEMLDVTFEGDPIEIGFNVSYVLDVLNTLRCEKVQVSMSDANASALIENADDDSAMYV
VMPIRL
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaaatttactattgaacgtagtcatttaatcaaaccgctacaacaggtttcgggcgct
ttgggtggccgaccaaccctgcctattttgggcaacctactgattaaagtagaagagaac
gtgctatcaatgaccgcgactgacttagaagtggaattggtgagcaaagtgactctagaa
ggggatttcgaagcgggtagtattaccgttccttcgcgtaagtttctcgatatttgccgt
ggcttgccagacgatgcgatcatcacttttgtgttagaaggcgatcgcgtgcaagttcgt
tctggtcgcagccgtttctcactggcaacgctaccagcgaatgacttcccgaacattgaa
gattggcaaagtgaagttgaagtatcactgagccaagcggacctgcgtacgcttatcgac
aaaactcagttctcgatggcaaaccaagacgtacgttactacctcaacggtatgttgttt
gaaatcgatggcacgacactgcgtagtgtggcgaccgacggtcaccgtatggcagtatcg
caaactcaactaggtgctgacttcgcccaaaagcaaatcatcgtgccacgcaaaggtgtg
caggaattggttaagctgatggatgcgccagagcaacctgtcgttttgcaaattggcagc
tcaaacgtgcgtgcagaagtgaacaactttatcttcacgtctaaactggttgatggccgt
ttccctgactatcgccgcgtattaccgcaacataccaacaaaacactgatcgcaagttgt
gatgaattgcgccaagcgttctcgcgtgctgcgattctttctaacgaaaagttccgtggt
gtgcgtgttaacttagcgggcagcgaaatgcgcattacggcaaacaacccagagcaggaa
gaagccgaagagatgctggatgtgacctttgaaggtgacccaatcgaaatcggcttcaac
gttagctacgtgttggatgtgctgaacacgctacgttgcgagaaggtacaagtgtcgatg
tcggatgccaatgccagtgcattgattgaaaatgccgacgatgacagtgccatgtacgtg
gtgatgccaattcgtctataa

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