KEGG   Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_02665
Entry
M634_02665        CDS       T02761                                 
Name
(GenBank) general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf03070  Bacterial secretion system
vpf05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vpf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    M634_02665
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    M634_02665
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpf02044]
    M634_02665
Secretion system [BR:vpf02044]
 Type II secretion system
  General secretion pathway protein
   M634_02665
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 LUD_dom
Other DBs
NCBI-ProteinID: AGQ89845
LinkDB
Position
I:533972..535996
AA seq 674 aa
MKHWFSKSAWLLAGSLLCVPGAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMDNGVLKVIKAKDSKTSAIPVMGDGSAKG
DSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEIIK
RVDQAGDKEIELVELRNASAAEMVRIVEALNKTTNQKSTPEFLEPKIVADERTNSILISG
DPKVRARLKRLIRQLDVEMATKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKQAGQKGA
SSAQRGEVVIAAHEATNSLVLTAPPDIMMALQDVISQLDIRRAQVLIEALIVEMSEGDGI
NLGVQWGSLETGAVIQYGNTGAPIGQVMVGLEEAKDVTKTESYWNSDTNKWENRQYTEEG
DYSTLASALGGVNGAAMSIVMGDWTALISAVASDSNSNILSSPSITVMDNGEASFIVGEE
VPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGANGAVD
VRFAKRQLNTSVMIQDGQMLVLGGLVDERALESESKVPLLGDIPVLGHLFKSTSTQTQKR
NLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKADQGLKLMSDDKIPVMPAFGQDRKH
PAEIQAFIDQMEKN
NT seq 2025 nt   +upstreamnt  +downstreamnt
gtgaaacattggtttagcaaaagtgcttggttactggcagggagtctactctgcgttcca
ggtgctatggcaaatgaatttagtgcgagtttcaaaggcactgacattcaagaattcatc
aacattgttggtcgtaacttagaaaagaccatcatcgttgacccttcggtgcgcggtaaa
atcgacgttcgcagctacgacgtgttaaacgaagagcaatattacagcttcttccttaac
gtgttggaagtgtacggctatgcagtcgtagaaatggacaacggcgtactcaaagtcatc
aaagcaaaagactctaagacctctgcaatccctgttatgggggatggtagcgcaaaaggc
gatagcgtcatcactcgcgtggttgctgtgcgaaatgtctctgttcgtgaattgtcaccg
ctattgcgccagctgattgataacgccggggcgggtaatgtggttcattacgatccagct
aacatcatcctgatcaccggtcgtgcagcggtagtaaaccgtctagcagaaatcatcaaa
cgcgttgaccaagctggtgacaaagagatcgagctagtagagcttcgcaatgcctcggct
gctgaaatggttcgtatcgtagaagccctgaacaaaacgaccaaccaaaagagcacgcct
gagtttcttgaaccaaaaatcgtcgcggatgagcgtacgaactcgatcctgatttctggc
gatccgaaagtacgtgcacgcctgaaacgtttgattcgtcaacttgacgtagaaatggca
acgaaaggtaacaaccgagtggtttaccttaagtatgcaaaagcagaagacctagttgat
gtactgaaaggtgtctctgacaacctgcaagccgaaaaacaagcgggtcaaaaaggtgca
tccagtgcacaacgcggtgaagtcgtgattgcggctcatgaagcaaccaactcacttgtt
ctgactgcgccgccagatatcatgatggctttgcaagacgtaatttctcaattagatatt
cgccgtgctcaggttctgattgaagccttgattgttgaaatgtccgaaggtgatggtatt
aacctaggcgttcagtgggggtcactagaaacgggtgccgtgatccagtacggcaacaca
ggtgcgccaatcggccaagtcatggttggtttggaagaagcgaaagacgttaccaaaacg
gaaagctactggaatagtgacacgaacaagtgggaaaaccgtcagtacactgaagaaggt
gactactcaacacttgcatctgctcttggcggcgtaaatggtgccgcaatgagcatcgtg
atgggtgactggacggcgctaattagtgcggttgcttcggattccaactcaaacatcctg
tcttctccaagtatcactgtgatggataacggcgaagcctcattcatcgtgggtgaggaa
gtgcctgttattactggctcgactgctggttcaaacaacgacaacccattccaaaccgtt
gatcgtaaagaagtcggtatcaagctaaaagttgtaccgcagatcaacgaaggtgactct
gttcagctaaatattgaacaagaagtctctaacgtattgggtgctaatggtgccgttgac
gttcgtttcgctaagcgccagcttaacacttccgtgatgatccaagatggccagatgctg
gtgctaggtggcttggttgatgaacgtgcactagaaagtgaatcgaaagtgccactgctt
ggtgatattccagtattgggtcacttgttcaaatcaaccagtacacaaactcagaagcgc
aatttgatggtcttcattaagccaaccatcatccgtgatggtatgaccgcagacggtatc
actcaacgtaaatacaactttattcgtgccgagcaactgtacaaggctgatcaaggtttg
aagttaatgtcggacgataaaattcctgtaatgcctgcatttggccaagatcgtaagcat
cctgctgaaatccaagcgtttatcgatcaaatggaaaagaactaa

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