Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_03065
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Entry
M634_03065 CDS
T02761
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf00541
Biosynthesis of various nucleotide sugars
vpf01100
Metabolic pathways
vpf01250
Biosynthesis of nucleotide sugars
Module
vpf_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
M634_03065 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpf01005
]
M634_03065 (rfaD)
Enzymes [BR:
vpf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
M634_03065 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vpf01005
]
Core region
M634_03065 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
adh_short
KR
Phage_T7_Capsid
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AGQ89909
LinkDB
All DBs
Position
I:complement(612346..613287)
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AA seq
313 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNEAGINDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQI
MAGDDFGPIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GDTDTFVEERKYEGALNVYGYSKQQFDNYVRRLWQDAEEHGETLSQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQLNAGENPKLFAGSESFKRDFVYVGDVCKVNLWFLENGVSGVFNC
GTGRAESFEEVAKAVIAHHGKGEIETIPFPEHLKGAYQEFTQADLTKLRAAGCDVEFKTV
AEGVAEYLTIQNR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggtggcgctggcatgatcggcagcaacattgttaaagcactaaac
gaagctggtattaacgatatcttggttgtcgacaacctaaaaaatggcaaaaagtttaag
aacttagttgatctggacatcacagattacatggatcgtgacgactttctgacccaaatt
atggcgggcgatgattttggtccgattgaggcaattttccacgaaggcgcttgctctgca
acgacagagtgggatggtaaatacatgatgctaaacaattacgagtactctaaagagctg
cttcattactgtttagatcgtgaaattccattcctatacgcctcttccgcagccacttac
ggcgatacagatactttcgttgaagaacgcaaatacgaaggcgcactaaatgtatacggt
tactcgaaacagcagtttgataactacgttcgtcgtctatggcaagacgctgaagaacat
ggtgagaccctttctcaaatcaccggcttccgttacttcaacgtatatggcccacgtgaa
gatcacaaaggcagcatggcatctgttgcgttccatctgaacaaccaactaaacgcaggt
gaaaatccaaaactgtttgcaggtagcgagtcttttaaacgtgatttcgtttacgttggt
gatgtatgtaaagtaaacctgtggttccttgaaaatggtgtttctggcgtcttcaactgt
ggtactggtcgtgcagaatcttttgaagaagtagcaaaagcggtcattgcccatcatgga
aaaggcgagattgaaactattcctttcccagagcatctaaaaggtgcctatcaagagttc
acgcaagcagaccttaccaagctacgcgctgccggttgcgatgttgagttcaagacggtt
gctgaaggcgttgccgaatacttaactatccaaaaccgttaa
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