Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_03265
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Entry
M634_03265 CDS
T02761
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M634_03265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpf03400
]
M634_03265
Enzymes [BR:
vpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M634_03265
DNA repair and recombination proteins [BR:
vpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M634_03265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
AAA_30
MarR
AAA_19
TrmB
Zot
HVO_A0261_N
Zn_ribbon_6
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AGQ89933
LinkDB
All DBs
Position
I:complement(652758..654962)
Genome browser
AA seq
734 aa
AA seq
DB search
MRPSIARVALPVPLDKQFDYAIPGHLFPIIGGRVSVPFGRQTLVGIVTAMVNHSDFPKDQ
LKPIKAVLDSQPVWSEKLYSLLTWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQ
ITESGKDKLMQGLDRRAVKQQKVLQMLVNGALPHQEFVDQEIASTVLKSLEEKGWIERIE
KKPVITQWGQHVECDVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIK
PVLEKGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNETERLNAWLSARDKAAGI
IIGTRSALLAPFADLGIIIVDEEHDTSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATP
ALETLHNALSGKYHHLTLTQRAGSAVPTTNKVLDVKGQYLESGLSAPLIAEMRKHLKAGN
QVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVIHQCQGC
GSTQLVTVGVGTEQLEQQLAQLFPEYKAIRIDRDSTRRKGSLEDALDSIRKGEYQILIGT
QMLAKGHHFPNVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTH
HPEHSLLQALLEKDYRHFAMTALEERKLAQLPPYSFLTLFKAEANQSEIVEDFLRQVRFT
LESHPLFDDTCIVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLSSAKPAIELLPNAK
KVRWNLDIEPQDLS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccatccattgctagagtggcactgcccgtacctctcgacaaacaatttgactat
gccatcccaggacacctgtttcctatcattggcgggcgcgtatccgtaccttttggacgt
caaacgttagttggcatcgtcaccgcgatggttaatcactcggactttcccaaagatcaa
ctcaagccaatcaaagcagttcttgattctcagccggtatggtctgaaaaactttattcg
ttgctgacttggtgcagccagttctaccaatacccacttggagatacgctacacaatgcg
atgccggcagctctgcgtaaaggaaagcctgcagattttgcgacgctacaagagtggcaa
attaccgaatccggtaaagacaagctgatgcaagggcttgatcgtcgagcggtcaaacaa
cagaaggtcttgcaaatgttggttaacggcgctttgcctcaccaggaatttgtcgaccaa
gagatagcctcaacagtactaaagtctttagaagagaaaggctggattgaacgtatcgag
aagaagcctgtaatcacccagtggggacagcacgttgaatgcgacgtcgagaagccaaag
ctcaaccacgaacaagcgctggctattgcgagtgtaaatagccaaacaggttttgcttgc
tatttattagagggtgtcacgggctcaggtaagacagaagtgtacctcaacctgatcaaa
ccggtcttagagaaaggtaaacaagctttggttttagtaccagagattggcttaacacca
caaaccatcaaccgctttaaacgccgttttaatgtgccagttgacgttatccactccgga
ttaaacgagacggagcgtctgaatgcgtggctttctgcacgcgacaaagcggccggaatc
attatcggaacacgctctgccctactcgcgccttttgctgatctcgggattatcattgtg
gacgaggaacatgacacctcttacaaacagcaagatagcttgcgttatcatgcacgcgat
gttgctgtaatgcgcgctcataaagaacaagttccgattgttctgggctcagccacacct
gcactggagacattgcacaatgccttgtcaggcaagtatcaccatttaaccctgacccaa
cgcgcaggctctgcggttcctactactaataaagtgctcgacgtcaaaggtcagtattta
gaaagtggtttatctgccccattgattgcggaaatgcgcaaacaccttaaagcaggcaat
caggtgatgttgtttcttaaccgtcgtggtttctcccctgctctcatgtgccatgaatgt
ggttggattgccgaatgcaaacgttgtgatgcttattacaccttccaccaatacagcaat
gagattcgctgccaccattgtggttcacagcaaccagtgattcatcagtgtcagggctgt
ggttcaactcaactggttaccgttggtgtcggtaccgaacagttagaacaacaattggca
caactgttccccgaatacaaagccatccgtatcgacagggatagtacgcgccgcaaaggt
agcttagaagacgcgttggactccatccgcaagggtgaatatcaaattttaattggcact
caaatgttagctaagggacaccatttccccaatgtaacgctcgttgccttgctagatgtt
gatggctctctatatagtagcgacttccgcgcctccgaaagattagcgcagctattcatt
caagtcgcagggcgagccggacgtgcaagtaagccgggggaagtagttttgcaaactcac
catcctgagcacagtttgttgcaagccttattggaaaaagactaccgacacttcgctatg
acggcattagaggaacgtaaactggcgcagttgccaccgtacagtttcctgactctattt
aaagccgaagcgaatcagagcgagatcgtagaagattttctgcgccaagttcgctttacc
ttagaatctcaccctttgtttgacgacacctgcatagtgcttggtccaacaccatcgcct
ctcgccaaacgcgcaggcaaataccgttggcagctgttactccaaacccagcaccgttca
ttaatgcaaaagttattaagcagtgccaaacctgctattgagttgttgcctaatgccaaa
aaagttcgctggaatttagacatagaaccacaagatctcagctag
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