Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_03445
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Entry
M634_03445 CDS
T02761
Symbol
cpdB
Name
(GenBank) 3'-nucleotidase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf00230
Purine metabolism
vpf00240
Pyrimidine metabolism
vpf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
M634_03445 (cpdB)
00240 Pyrimidine metabolism
M634_03445 (cpdB)
Enzymes [BR:
vpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
M634_03445 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
M634_03445 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
DUF4649
Motif
Other DBs
NCBI-ProteinID:
AGQ89968
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Position
I:complement(674597..676558)
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AA seq
653 aa
AA seq
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MKMAVNPISVAVLSGMLTLAGPAMADTIKLRIIETTDIHTNVMDYDYYKDQPSQQIGLSR
AATLVKQAKSEVENSVLVDNGDLIQGSPMGDYMAAKGIQAGEVHPVYKAMNQLHYDVGNI
GNHEFNYGLDFLQNTLAGANFPYINANVFDKKTGEHYFQPYLIKTHSFKDTDGEVHQVKV
GYIGFVPPQIMVWDKKNLEGNVVAKDIKETAEKLIPQMKKEGADIIVAIPHSGVSTDPYK
LGAENSVYYLTQVKGIDAIAFGHSHAVFPGKGFENLQGVDNNKGTINGVTAVMPGRWGSH
VGVMDLVIEQKDGQWQVVEGQSEARPIFDKATKKSLAEADQGIIKALEDDHKGTREFVNQ
PIGKANDVMYSFLALVQDDPTIQIVNLAQKDYVERFIQGDPDLADIPVLSAAAPFKVGGR
KDDPNGFTEVESGQLTFRNAADLYLYPNTLVAMKVKGKEVHEWLECSAGQFKHIDVNTTQ
PQSLIDWDNFRTYNFDVIDGVEYQIDITQPPKYDASCKVINPDSQRIVNLTFNGKPVDPK
QDFIIATNNYRAYSNTFPGTGPDFIAFDSPDENRSVVAAYISRVSEEKGEVTPSADNNWS
FAPIKSDKKLDIRFETSPSEKASKFIQDKGQYPMKRVATDEVGFAIYQIDLNK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcagttaatcctatttccgtcgcagttttgagtggcatgttgacgcttgca
gggccagcaatggcagacacgattaagcttcgcattattgaaaccactgacatccatacc
aacgtgatggattacgattactacaaagaccaaccatcacaacaaattggtttgagccgc
gcagccacattagttaagcaggcaaaatccgaagtggaaaacagcgtgttggtcgacaac
ggcgacttaattcaaggtagcccgatgggtgactacatggcagcaaaaggcatacaggct
ggagaagttcatcctgtgtacaaagccatgaaccaattgcactatgatgtggggaatatt
ggtaaccatgaattcaactatggtttggacttcctacaaaatacgctggccggcgcgaac
ttcccctacatcaacgccaatgtgtttgataagaaaactggcgagcattacttccaacct
tacctgatcaaaacacacagttttaaagataccgatggcgaagttcatcaagtaaaagtg
ggttacatcgggtttgttccaccgcaaatcatggtttgggataagaaaaatcttgaaggc
aacgtggttgccaaagacatcaaagaaactgcagagaagctgattccgcagatgaagaag
gaaggtgcggacattattgtcgcgattccgcattcaggggtttcaaccgatccatataaa
ctaggtgcggagaactcggtgtactatttaacgcaagtaaaaggcattgatgccattgcg
tttggtcactctcacgcggtcttcccaggcaaaggatttgagaatctacaaggcgtagac
aacaacaaaggcaccatcaacggtgtcactgccgtcatgcctggccgttggggtagccac
gtgggagtcatggatctggtcatcgagcaaaaagacggccaatggcaagtagtggaggga
caatctgaagctcgaccaattttcgacaaagcgactaagaaatcgcttgcagaagcagac
caaggcatcattaaagcactcgaagacgatcacaaaggcactcgcgaattcgttaaccaa
ccaattggtaaagcgaatgacgtgatgtacagcttcttggctttggtgcaagacgaccca
acaatccaaatcgttaaccttgcacaaaaagactacgttgaacgtttcattcaaggcgat
ccagacctagctgacattccagttttgagcgcggcagcgccttttaaagtgggcggacgt
aaagatgatccgaacggcttcactgaagttgaatctggccaactgactttccgcaacgcc
gccgacttgtacctatacccaaatacgctcgtagcaatgaaggtgaaaggcaaagaagta
catgaatggctagagtgcagcgcaggccaattcaagcacattgatgtcaatacgacacag
ccacaatcgttaattgattgggataacttccgtacgtacaactttgacgtgattgatggt
gtggaataccaaatcgacatcactcaaccaccgaagtacgacgcgagttgtaaagtcatt
aatccggactcccagcgtatcgtgaatctgactttcaatggcaaaccagttgatccgaaa
caagatttcatcattgcgactaacaattaccgcgcgtacagcaataccttccctggcacg
ggtccggacttcattgcatttgactctccagacgaaaaccgttctgtggttgctgcgtac
atttctcgcgtcagtgaggaaaaaggcgaagtcacgccaagcgctgacaataactggtcg
ttcgcaccaattaagtcagacaaaaaactggatattcgctttgaaacctcaccgagcgaa
aaagcttcgaagtttatccaagacaaaggccaatacccgatgaaacgcgtcgcaactgac
gaagtgggctttgcgatttatcagatcgatttaaacaaataa
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