Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_04385
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Entry
M634_04385 CDS
T02761
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M634_04385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpf03400
]
M634_04385
Enzymes [BR:
vpf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
M634_04385
DNA repair and recombination proteins [BR:
vpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M634_04385
Prokaryotic type
M634_04385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGQ90122
LinkDB
All DBs
Position
I:890334..891014
Genome browser
AA seq
226 aa
AA seq
DB search
MNQSPTWHDVIGEEKKQSYFVDTLNFVEAERAAGKAIYPPAKDVFNAFRFTEFNDVKVVI
LGQDPYHGPNQAHGLCFSVLPGIKTPPSLVNMYKELAQDIEGFQIPQHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQHGVVFLLWGSHAQKKGRFIDRSKH
HVLAAPHPSPLSAHRGFLGCKHFSQANQLLASQGKEPINWHLPLTV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcacccacttggcacgatgtgatcggcgaagagaaaaagcagagctacttt
gtagacacgttgaattttgttgaagcagaacgagcagcaggcaaagcgatttacccgcca
gcaaaagatgtttttaacgcatttcgtttcacggagtttaacgatgtgaaagtggtgatc
ttaggacaagacccataccacggtccaaatcaggcgcatggtttgtgcttctctgtgctt
ccaggaatcaaaacgccaccgtcgctcgtgaacatgtataaagaattggctcaagatatc
gaaggattccagatccctcagcacggattcttgcaaagctgggcagagcaaggcgtattg
ttgctcaatacggttttgacggttgagcaaggcaaagcgcactcacactctaaaacaggg
tgggaaacattcacagaccgagtgattgaagcgataaaccagcatcagcatggggtcgtg
ttccttttatggggttctcacgctcagaagaaagggcgtttcatcgaccgctcgaagcac
catgtattagccgcgccgcatccatcgccattgtctgctcatcgaggattcttgggttgt
aagcatttctcccaagcaaaccaattacttgcttcgcaaggaaaagagccaatcaactgg
catttaccgttaacggtataa
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