Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_08860
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Entry
M634_08860 CDS
T02761
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf03030
DNA replication
vpf03430
Mismatch repair
vpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M634_08860
03430 Mismatch repair
M634_08860
03440 Homologous recombination
M634_08860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpf03032
]
M634_08860
03400 DNA repair and recombination proteins [BR:
vpf03400
]
M634_08860
Enzymes [BR:
vpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M634_08860
DNA replication proteins [BR:
vpf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M634_08860
DNA repair and recombination proteins [BR:
vpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M634_08860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
ARM_5
DUF3487
Motif
Other DBs
NCBI-ProteinID:
AGQ92107
LinkDB
All DBs
Position
I:1856074..1856820
Genome browser
AA seq
248 aa
AA seq
DB search
MMWLAKSKASTPLLDTSQTPEWSVLFEQLAEQAQDQRLKRYYSTPMVNGDTPLKEVPFVS
VDFETTGLNAEDDAILTIGLVPFTIDRVQCSGSAHWIVNPNRELNEESVVIHGITDSEVK
NAPQLTQILGEILDALAGKVVLVHYKNIERQFLHNALLNTIGEGIQFPVVDTLDIEYALQ
RRECSGIWNKLKGKKPGSVRLGHARERYGLPVYQPHHALTDALATAELFQAQLQYHFNRD
MPISAIWQ
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggttggcaaaaagtaaggcgagtacaccgctgctcgatacttcgcaaacgccg
gagtggtcagtattgtttgagcagttggcagagcaagcgcaagatcaacggttgaagcga
tactattcgactcctatggtgaatggggatacgccattaaaagaggtgccgtttgtctcg
gtagattttgaaacgacgggcttaaatgcagaagacgatgccattcttaccattggtctt
gtgccgtttacgattgaccgagtgcagtgcagtggttcagcgcattggattgtaaatccg
aaccgagagcttaatgaggagtctgttgttattcatggcattacggattctgaagtgaaa
aacgcaccccagttaacacaaatactaggtgagattttggatgcgctcgctggcaaggtg
gtgctggtgcattacaagaatatcgagcgacagtttttgcataacgcacttttaaacacc
attggtgaagggatccaatttcccgtcgtcgatacattggatatcgagtacgcacttcaa
cgccgagaatgctcaggcatttggaacaagttaaaaggtaagaagccgggctcagtgagg
ttagggcacgctcgggagcgatacggtctgccagtttatcaaccgcatcatgcattaacg
gatgccttggcgacggcagagctgtttcaagctcagttgcaatatcactttaaccgagac
atgccaatttctgctatttggcaataa
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