Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_13320
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Entry
M634_13320 CDS
T02761
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M634_13320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpf03000
]
M634_13320
Transcription factors [BR:
vpf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
M634_13320
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AGQ91378
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Position
I:2756605..2757480
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSVNLRLLNRHARKLSLTEA
GERFYHECSPLLQRLTSTAEEITDDCRGASGKIKISAPYNLTKRMMMPMFNDFMKKYPDI
NIELTTENNADQLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASQDYLAANPAPNHA
EELSNHSLLKGYPLIKWTLINSKGESVVNVERGRFQANALNVVRSACSEGLGITLMPDVM
IKEYIESGELLRVLPDWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYNIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgatttgaacctgtttcgactggttgtcgaaaatgggagctataccgca
acttcgcgaaaaaccatgatcccggtggcaaccatcacccgacgcattcaagcgctagaa
gactctgtcaatcttcgactattgaaccgtcacgcacgtaagctttctctgactgaagcc
ggagaacgcttttaccatgaatgctctcccctacttcaaaggctgacatcaaccgcggaa
gaaatcaccgatgactgccgcggtgcatcaggcaaaattaaaatttctgcgccttacaat
ctgaccaagcgcatgatgatgccgatgtttaatgacttcatgaagaagtatccggatatc
aatatcgagctgacgacagagaacaacgctgatcaattagacccaacggaatgggatgtt
attttccgtgtaggtccgcaacgagattccagcctaattgctcgtaaaattggcgaagta
aaagatattttggttgccagccaagactatctagcagccaaccctgcgccaaaccacgca
gaagagctctcaaaccactctttgctaaaaggctacccacttatcaagtggacactgatc
aacagcaaaggtgagtctgtggtgaacgtagagcgtggtcgtttccaagccaacgcactc
aatgttgttcgcagtgcttgttcagaaggtctaggtattacattaatgcctgatgtgatg
attaaggaatacatcgaaagtggtgaattgttgcgagtattgccagattggagcgcaaac
ccgcgcgacatctacatgctgtacaaccacaaagatcacttgccagagaaagtacgtctg
ttcatcgactttgtgattgcctataacattcactaa
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