Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_13875
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Entry
M634_13875 CDS
T02761
Name
(GenBank) murein transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpf01011
]
M634_13875
Enzymes [BR:
vpf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
M634_13875
Peptidoglycan biosynthesis and degradation proteins [BR:
vpf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
M634_13875
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
AGQ91487
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Position
I:2869181..2870767
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AA seq
528 aa
AA seq
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MRLKYSWALVLLLSGCQLTQPNSSTTPTPETNKSEQTAKQNASKTKSKNKQSLAKDSAKD
TPKVLSPQEQEDVWQRIAMQLEMDIPNNKKVDYYRTWYLKHPNHLYTVSKRAAPFLYMIT
QRIEERGLPMELALLPVVESSFDAFAYSHGSAAGLWQFVPGTGKMMGLEQNYWYDGRRDV
AASTDAALDYLVQLNERFDGNWEHAIAAYNSGGGRVSSAIRKNKKLGKPVDFFSLDLPKE
TSSYVPKLLALADVVANQEKYGIDIPSIPNKPVLTLVDPKEQLDLAIAADYAGIGVKELQ
SYNPAYNQWSTAPEGPHQLLIPVEKKEAFLTQVESNRGKGMKVARYKVKSGDSLSMLAKK
YGTTSKVIRRANGLSNNNIRIGQYLLIPTSTKDDSKYALTAQNRLNKTQSQARGQLKLSH
VVQSGESLWSIARDNKVSHQSLAKWNGMGPKDTLRVGQKLVIWKKSDQGAVIRTVFYNVR
SGDTISGIASKFKVKSNDIVKWNSLHKQKYLKPGQKLKLYVDVTKVSV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgaagtatagctgggcgttggtgttgttattatctggctgtcaattgactcag
ccaaattcgtccaccactccaactccagaaaccaacaagtcagagcaaactgctaagcag
aatgccagtaagactaaatctaaaaacaaacaatctttggcgaaagattctgccaaggat
acgccaaaagttctctcccctcaggaacaagaagatgtgtggcaacgtattgctatgcag
cttgaaatggacatcccaaacaacaagaaagtggattattaccgtacgtggtatttgaaa
cacccaaaccacctgtacacggtatctaaacgtgcagcgccatttctttacatgatcacg
caacgtatcgaagaacgtggtttgccaatggagcttgctcttctaccggttgtggaaagc
tcatttgacgctttcgcctactcgcacggtagcgcagcaggtttgtggcagtttgtgcca
ggcaccgggaaaatgatggggcttgaacaaaactactggtatgacgggcgtcgcgatgtc
gctgcctctaccgatgctgcattggattatcttgttcaattaaatgaacgttttgatgga
aactgggaacacgcaatcgcagcctacaatagtggcggcggtcgtgtatctagtgctatc
cgtaagaacaaaaaattgggtaaacctgtcgactttttctctttagatctgccaaaagag
accagtagctacgtgccaaaacttctcgctcttgcggacgtggtggcaaaccaagaaaag
tacggtatcgacattccatctatcccaaacaaaccagtgctgacgttagtcgatccgaaa
gaacaactggatctcgctatcgctgctgattacgcgggcatcggggtaaaagagctgcaa
agctacaaccctgcctacaaccaatggtccaccgcaccagaagggcctcatcagcttctt
attcctgtggagaagaaggaggcgttcttaactcaagttgagagcaatcgcggtaaaggc
atgaaagtcgcgcgttacaaagtcaaatctggcgactcgttgagtatgttggcgaagaaa
tacggtacgacctcaaaagtgattcgtcgtgctaacggcctgtcgaacaacaacattcgc
attggtcagtacttacttattccgacgtcaaccaaagacgattcaaagtacgcacttaca
gcgcaaaaccgtttgaacaaaacgcaatcgcaagctcgtggccagctgaaactgtcacac
gttgtgcaatcgggtgaaagtttgtggtctatcgctcgtgacaacaaggtttcacaccaa
tcgctagcaaaatggaacggcatgggaccaaaagataccctgcgcgtcggtcaaaagctg
gtgatttggaaaaaatcagaccaaggcgccgtgattcgtaccgtgttctacaatgttcgc
tctggcgacaccatcagtggcatcgcaagcaaattcaaggtgaagagcaacgacatcgta
aaatggaactcactgcataagcagaagtacctaaaaccgggtcaaaaacttaagctgtac
gtagatgtaactaaggtaagtgtatga
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