Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_14645
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Entry
M634_14645 CDS
T02761
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpf03016
]
M634_14645 (truB)
Enzymes [BR:
vpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M634_14645 (truB)
Transfer RNA biogenesis [BR:
vpf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M634_14645 (truB)
Prokaryotic type
M634_14645 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGQ91625
LinkDB
All DBs
Position
I:complement(3040834..3041778)
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AA seq
314 aa
AA seq
DB search
MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVDVTLEKLEASIEKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIILHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTAVAKYPYEKMVTLEQLNELLEQAHREEIAPRELLDPLL
MPMDTAVEDLPEVNLIPELADMVQHGQPVQVLGAPEQGSLRLTMGEERLFIGVGEMNDDG
KIAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggtgttatcttgttggataaaccaaca
ggtatttcttccaatgatgcactgcaaaaagtaaagcgaatctactttgctgagaaagcg
ggtcacactggtgcgttggaccctctagcgacgggtatgttgccgatctgtttaggtgaa
gcaaccaagttttctcagttcctactggattcagacaaacgctatcgcgtgatcgcgaaa
cttggcgaacgtactaacacttcagactctgatggtgaagtggtagaaacgcgtccagta
gatgtgactctcgagaaactagaagcgagtatcgagaagttccgtggcgaatctgaccaa
gtgccgtcgatgttttctgctttgaagtaccaaggcaaacctctgtacgagtacgctcgt
aaaggtatcgaagttccacgtgagtctcgtaaaattacggtatacgaaatcattcttcac
cgttttgaaggtgatgaagttgagatggaggtgcactgttcaaaaggcacttacattcgt
actatcgtcgatgacttgggcgaaatgctcggttgtggtgctcacgtaactatgctgcgc
cgcacagctgtagccaagtatccttacgagaaaatggtgactcttgagcagcttaatgag
ctgcttgagcaagctcatcgtgaagaaatcgctcctcgcgagttgctcgatccactgctt
atgccaatggacactgcagttgaagacttaccagaagtaaacctaattcctgaattagca
gatatggttcagcatggccagccggttcaagtattaggtgcaccagagcaggggtctctg
cgcctgactatgggcgaagaacgtttgtttatcggtgttggtgaaatgaacgatgatggt
aagatcgcaccaaaacgtttagtcgttttccgcgacgaagagtaa
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