Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_14955
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Entry
M634_14955 CDS
T02761
Name
(GenBank) LuxR family transcriptional regulator
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf02020
Two-component system
vpf02024
Quorum sensing
vpf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M634_14955
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M634_14955
05111 Biofilm formation - Vibrio cholerae
M634_14955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpf03000
]
M634_14955
Transcription factors [BR:
vpf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
M634_14955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
DUF3755
Radial_spoke_3
TetR_C_11
HTH_7
LacI
Motif
Other DBs
NCBI-ProteinID:
AGQ91674
LinkDB
All DBs
Position
I:3117989..3118603
Genome browser
AA seq
204 aa
AA seq
DB search
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTR
EDLVDEVLNHVVRQFSNFLSDNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSAS
TRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSEHLANLFHGICYSLFVQANRF
KGEAELKELVSAYLDMLCIYNREH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggactcaattgcaaagagacctagaactaggctttctcctcttaaacgtaagcaacaa
ctcatggaaatcgcgttagaagtatttgcacgccgtggtattggccgtggtggtcacgca
gatattgctgaaattgcgcaagtgtctgttgcaaccgtttttaactacttcccaactcgc
gaagatttggttgatgaagttctcaaccatgttgtccgtcagttctcgaatttcctttcg
gataatatcgacctagacatacacgctcgtgaaaacatcgcaaacatcaccaatgcgatg
atcgagcttgtaagccaagattgtcactggctgaaagtttggttcgagtggagcgcatca
actcgtgatgaagtttggcctctatttgtgtctaccaaccgcactaaccaattactggtt
caaaacatgttcattaaagcgattgaacgcggtgaagtgtgtgatcaacacgattcagaa
cacttggcaaatctattccacggtatttgttactcgctgttcgtacaagcaaaccgcttc
aaaggtgaagctgagttgaaagaactcgtgagcgcttacctagatatgctttgcatctac
aatcgcgaacactaa
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