Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_15210
Help
Entry
M634_15210 CDS
T02761
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpf03016
]
M634_15210
Enzymes [BR:
vpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
M634_15210
Transfer RNA biogenesis [BR:
vpf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M634_15210
Prokaryotic type
M634_15210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGQ91711
LinkDB
All DBs
Position
I:complement(3165728..3166771)
Genome browser
AA seq
347 aa
AA seq
DB search
MSDILSSLAYLTGKPVASAKIKAQPEHFQVREDLGFAFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGETPDFSTFLAQYPSIEILAIDRH
NKKLRPGDLIGNEFVVTLSEVTDVADVEQRLEKVKQVGVPNYFGSQRFGNDGNNLDEARR
WGRENVRTRNQNKRSMYLSAARSWIFNRIVSARLENGVFDKFIDGDIAQTSQGLLAVDAN
NLADMQNKLALSEVEITAALAGDNALPTQADALALEQPFIDEEPDLMALIRGNRMRHDRR
EIALKPKDLAWNVEGNNITLTFSLDAGSFATSIVRELVNEVKVEREY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattttatcctcattggcttacctcacaggcaagccagtcgcatcagcaaaa
attaaagcgcaaccagaacactttcaggttcgcgaagatttgggttttgccttcacggga
gaaggtgaacacttaatggtgcgcattcgaaaaacaggtgagaacaccagtttcgtcgct
aacgagctagcgaaagcttgtggtgttaagtctaaagacgttagttgggcaggcctgaaa
gatcgccatgcagtaaccgaacaatggctaagtgttcatctgcctaaaggtgagactcca
gatttttcgacatttttggcgcaatacccaagtattgaaattctggcgatcgatcgacac
aacaaaaaactgcgtcctggtgacttaatcgggaacgagtttgtggttaccttgtctgaa
gtgacagatgtggcggatgtagagcaacgccttgaaaaagttaaacaagttggtgtgcca
aactactttggtagccaacgctttggtaacgatggaaataacctcgacgaagcccgtcgt
tggggacgagagaacgttcgtacgcgtaaccaaaacaaacgcagcatgtacctgtctgca
gcacgttcatggatcttcaaccgcatcgtttctgctcgtctagaaaatggtgtgtttgat
aaattcatcgatggtgacatcgcacagacatcacaaggattgttggctgttgatgcgaat
aaccttgctgatatgcaaaacaagcttgcattgagtgaagttgagattactgccgcttta
gcgggtgataatgcgttaccgacccaagctgatgcacttgcattagaacagccatttatt
gacgaagaacctgatttaatggctctaatccgtggtaatcgtatgcgtcatgatcgtcgt
gaaatcgcactcaaaccaaaagacttagcttggaacgttgaaggtaacaatattacgttg
accttctcactcgatgcaggctcttttgccacatccattgttcgtgagttggtgaatgag
gtcaaagtagaaagagaatactaa
DBGET
integrated database retrieval system
