Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_15945
Help
Entry
M634_15945 CDS
T02761
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpf03021
]
M634_15945
Transcription machinery [BR:
vpf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
M634_15945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
RelB-like
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGQ91820
LinkDB
All DBs
Position
I:complement(3298641..3301550)
Genome browser
AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV
IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAVVLREIFLSNQIRFNKPQDKLYAGQI
DRMDNFVLRYRALTNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
DAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
SLAERTPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYAPVADAITSLF
SGEKLPDEAKNQITELLSEQDVEPLFRIIESNSDEEAKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPARNVHLMPMDIPQQYTTSMRVAGMIGGKMSSEARAMKNLYPEEIFQEFE
GDDASWWQFDSRVNWLLEKVKEKRGEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQNRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEILASGD
TSTLDEIIEESAKLNKELKSQLEQGRDRLLEMHSNGGEKAQQIVEKIESTDGDTNLVTFA
LSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMIQGGIDLLMSESVGTSAVSLLKNKALPVGTILLELIYAVDAQAPKRSGITRFLPKT
PIRLMMDSRGNDLSAQVEFEGFNRQLSPVNRHLGSKLVTSVQKDVHRLIEAGDVLVEEKV
EAVRKQAQQDMQQSLNAELERLQALKAVNPNIRDEEIEAIEAQIKELTGYINQAQVQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttggggcagcgctggattagcgatacggaaagcgatttaggtttaggt
accgtagtagcaatggatgctcgtactgtgacattgatgtttgcagcgtcagaggaaaac
cgagtttacgcacgtaacgatgcacctgttacccgagtaacgtttaacgtcggtgatgtc
atcgattgccaagaaggttggtctctgaaagttgaagaagtactggaagatgaaggtctg
tacacctatttcggtactcgtgaagacacgcaagaaaccgcagttgttctgcgtgagatt
ttccttagcaaccaaattcgtttcaacaaacctcaagataagttgtacgccggtcaaatc
gaccgcatggacaacttcgttcttcgttaccgtgcgctaaccaaccagtttgaacagcac
aagagcccaatgcgtggcttgtgtggtatgcgagcaggtttgatccctcatcagctttac
atcgcgcacgaagtcggtcgccgtcacgcgccacgcgttttgttggcggatgaagtaggt
ttgggtaagaccattgaagcgggcatgatcatccaccagcaagtgctgtctggtcgtgct
gaacgcattttgattgtggtgcctgaaacactgcaacaccaatggctagttgagatgatg
cgtcgtttcaacctgcatttctctatcttcgacgaagagcgttgtattgaagcattcgcg
gatgctgaaaacccatttgatactcagcaatacgtgctgtgttcactagatttcctacgt
aagagccgcaagcgttttgaacaagcgttggaaggtgagtgggatctgcttgtcgtcgat
gaagcgcatcaccttgagtggagccaagacaaaccaagccgtgaataccaagtggtagaa
agcttggctgaacgaactccgggcgtgttgctactgacggcaacaccagaacagcttggt
cgtgaaagccactttgctcgtctacgcctgctggatcccgatcgtttctatgattacgaa
gcgtttgtcgaggaagaagagcaatacgcgcctgtagcggatgcgattacttcactattc
tcaggcgaaaagctgcctgatgaagcgaaaaaccagatcactgagctgttgtctgaacaa
gacgtagaaccacttttccgcattatcgaaagcaacagcgatgaagaggcgaaagcatca
gctcgccaagagctaatcgataacctaatggaccgtcacggtacggggcgtgttttgttc
cgtaacacgcgtgcggcaatcaaaggtttcccagcgcgtaatgtgcaccttatgccgatg
gatatcccacagcagtacaccacgtcaatgcgtgtggcagggatgattggcggtaagatg
agttctgaagcgcgtgcgatgaagaacttgtacccggaagaaattttccaagaatttgaa
ggcgatgacgcaagctggtggcagtttgactcacgtgtgaactggctacttgaaaaagta
aaagagaaacgcggcgagaagattctcgtgattgcttctcgtgcgagcacggcattgcaa
ttggagcaagcgctgcgtgaacgcgaaggcatccgtgcgacggtcttccacgaaggtatg
tcgattcttgagcgcgacaaagctgcggcttactttgcgcaagaagaaggcggtgcacag
gttctgatctgtagcgaaatcggttctgaaggtcgtaacttccaatttgccaaccaattg
gtgatgttcgacttgccattcaacccagacttgcttgaacaacgtattggtcgtttggac
cgtatcggtcaaaaccgcgatatcgacattcatgttccttacctgaaaggtacatcgcaa
gcgatccttgcgcgttggttcgatgaaggtctgaacgcctttgcagaaacctgcccgaca
ggtcgtgcggtttatgacaagtactcagacgctctgattgagattctggcgtcaggagat
accagcactctggatgagatcatcgaagaatcagcgaagctgaacaaagaattgaaatcg
caactagagcaaggtcgtgaccgcttgctagaaatgcactctaacggcggcgaaaaagct
cagcaaatcgttgagaaaattgaatcaactgatggtgatacaaacctagtcacgtttgcg
ctttctctgtttgatacgattggtttgaaccaagacgacaaaggcgaaaatgcactggtg
gtgacgccatcagagcacatgatggtgccaagctaccctggtttgccatacgaaggtgcg
acgatcacttttgatcgcgataccgcgctttctcgtgaagacatgcacttcatcagttgg
gaacacccaatgatccaaggtggtatcgatcttctgatgagtgaaagtgtggggacttct
gcggtatctctgttgaaaaacaaggcgttgccagttggtactattctgcttgaactgatt
tacgcggtagatgcgcaagcaccaaaacgtagcgggatcactcgtttcttaccgaaaacg
ccaatccgtctgatgatggactctcgcggtaacgatctatcggctcaagtagagtttgaa
ggtttcaaccgtcaacttagcccagtaaaccgtcatcttggcagcaagctggtgacgtct
gtgcaaaaagacgtgcaccgtttgattgaagcgggtgatgtgctggttgaagagaaagtg
gaagccgttcgtaagcaagcgcagcaagacatgcaacaaagcttgaatgcggagctagag
cgtttacaagctttgaaagcggtgaacccaaacattcgtgatgaagagattgaagcgatt
gaagcgcaaatcaaagagctgactggttacatcaatcaagctcaagtgcagctagattcg
ctccgtctgattgtggtgagccacaactaa
DBGET
integrated database retrieval system
