Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_16040
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Entry
M634_16040 CDS
T02761
Name
(GenBank) MSHA biogenesis protein MshE
KO
K12276
MSHA biogenesis protein MshE
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M634_16040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpf02044
]
M634_16040
Secretion system [BR:
vpf02044
]
Type II secretion system
MSHA pilus biogenesis protein
M634_16040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_22
AAA_11
AAA_30
AAA_29
AAA_23
AAA_19
Rad17
nSTAND3
NTPase_1
ATPase_2
ResIII
AAA_18
AAA_7
Zeta_toxin
DUF2949
SRP54
cobW
AAA
AAA_14
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGQ91837
LinkDB
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Position
I:complement(3324013..3325737)
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AA seq
574 aa
AA seq
DB search
MKIQLRKRLGDLLVEEGIVSEDQIQQALSAQRSTGQKLGDALIDLGFITEKQMLEFLSQQ
LGLPLIDLGRAPVDADAVQILPEVHARRLRAMVVARNGDTLRVAMSDPADLFTQESLMNL
LGEYNLEFIIASERQLISSFDRYYRRTKEIASFAEQLQAEHQDVQSFDYGIDEADSEEVT
VVKLVNSMFEDAVQVSASDIHIEPDDKVLRLRQRVDGVLHETILNEVNIASALVLRLKLM
AHLDISEKRLPQDGRFNIKVRGQSIDIRMSTLPTQYGESVVMRLLNQSSGLRPLEESGLP
PELLARLRRQLSRPHGMILVTGPTGSGKTTTLYGALSELNEPGKKIITAEDPVEYRLPRI
TQVQINSKIDLTFSRVLRTFLRQDPDIILIGEMRDQETVEIGLRAALTGHLVLSTLHTND
AVDSALRMIDMGAPGYLVASAVRAVVAQRLVRRVCPDCKTQDHLDESRQQWLAGRFPNQV
GVTFHKGAGCQNCNLTGYRGRIGVFEMLELEHEMMDKLRANDAVGFAQAARRSENYKPLL
ASAMELALQGAVSLDEVMTLGEGDASGKTDPIFM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcagttgagaaaacgtttaggtgacctactcgttgaagaaggtatcgtatcg
gaagatcaaatccagcaagctctatccgctcagcgcagtaccggacaaaaattaggtgat
gccctgattgatctcgggtttattaccgaaaagcaaatgctggagttcttgtctcagcaa
ctaggattaccgttgatcgatcttggacgtgctccagtggatgcggatgcggtgcaaata
ctaccagaagtgcatgctcgtcgtttacgtgcaatggtggtggctcgtaatggtgacact
ttacgtgttgcgatgagtgatccggcggatctgtttacccaagagtctttaatgaacttg
ctaggtgagtacaaccttgagttcatcattgcctctgagcgtcagttgatcagcagtttc
gaccgttactaccgccgtaccaaagagatcgcgtcctttgctgagcagttacaagcagag
caccaagacgtacaaagctttgactatggcatcgatgaagctgacagtgaagaagtcacc
gttgtaaaactggttaattcgatgtttgaagacgcggtgcaagttagtgcatcggatatc
catatcgaaccagacgataaagtcctgcgtttacgccagcgtgtcgatggtgtgctgcat
gaaaccattctgaacgaagtgaacatcgcttctgcattggtattacgccttaaattgatg
gcgcacttggatatttctgagaagcgtctgccacaagatggtcgcttcaacatcaaagtt
cgtggccaatcgattgatattcgtatgtcgacgttaccaactcagtatggtgaatcggtt
gtaatgcgtctgcttaaccagtcgtcaggtttacgtccattagaagaatcgggtttaccg
cctgagctactggcgcgcttgcgtcgtcagttatctcgtcctcatggcatgattttggta
accggccctacgggatcgggtaaaaccacgacactttacggcgcgttgagtgagctcaat
gaaccgggtaaaaagatcatcaccgcagaagatccggtggaataccgtttaccacgtatc
acgcaagtacagatcaacagcaagatcgacctgacattttcacgcgttctacgcaccttc
ttacgccaagacccagacatcattttgattggtgagatgcgtgaccaagagacggtagag
attggcttgcgagcagcattaacaggtcacttagtattgagtacgttgcacaccaacgat
gcggtcgacagcgcactgcgtatgatcgacatgggggcgccaggctatctcgttgccagt
gccgtgcgtgccgttgtggctcagcgattggttcgccgtgtttgtccagattgtaaaacc
caagatcatctcgatgagtcgcgtcaacaatggttagcagggcgttttccaaatcaagtt
ggggtgactttccataaaggggctggttgtcaaaactgtaacttgacggggtatcgaggt
cgaatcggtgtgtttgaaatgcttgagctggaacatgagatgatggacaagctgcgtgcg
aatgatgcggttggctttgcacaagcggctcgacgttcagaaaactacaaaccgcttctt
gcctcagcaatggagcttgcactgcaaggtgctgtgagcctggatgaagtgatgaccctc
ggcgagggtgacgcttcgggtaaaactgatcccattttcatgtag
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