Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_16495
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Entry
M634_16495 CDS
T02761
Name
(GenBank) capsular polysaccharide biosynthesis protein
KO
K20920
polysaccharide biosynthesis protein VpsM
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M634_16495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpf02000
]
M634_16495
Transporters [BR:
vpf02000
]
Other transporters
Pores ion channels [TC:
1
]
M634_16495
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BBP2_2
OMP_b-brl
OmpA_membrane
Nuclease_act
Motif
Other DBs
NCBI-ProteinID:
AGQ93888
LinkDB
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Position
II:50209..51414
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AA seq
401 aa
AA seq
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MKTTTPALALALCSTAALAEPMAYQTESGIEFIPLVKAFYEGDDNINKAEKSQDIESVNI
WGLEPSLLARIERNQYRADIQYKLKAGFSSDDKNDYDDHTFQFTNFFEFNHRHRLVVDYR
FQALHEIRGEDITEGQGNLLDSPIEFYRNDLKTNYVFGSTGAKGRFEFGLGYSDKTYQNY
RNGLPGKPNAKTKYNDFRAPNAHVEFYLRATPKTYWLVGTKQVFTEYLNKNPRAASKDSD
TGFYYTGAEWEISGKTQGIARLGYQVKDFDSEQRETFKGFSWDIGFEWLPQEQTLVTVKT
TQAAVNPDQDGDYNLQTRYRLDIKHDWNSYLATRLGGIYQEDDYTGITRNDERYTLSAGV
DYQIRRWIQLKADWQYQDKTSNRSGYSYDQNVWTLSAQFSL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacaactccagcacttgcgcttgccctttgttcaactgctgcattagcagag
ccaatggcatatcaaactgaatctggcattgagtttatcccattggtcaaagcgttctac
gaaggcgacgacaacataaacaaagcggaaaaatctcaagatatagaatctgtcaacatt
tgggggctagagcctagcttgttggcacgtatcgaacgcaatcaatatcgcgcagacatt
cagtacaagctaaaagcgggcttttcttcagacgataagaatgattacgatgaccatacc
tttcagttcaccaatttttttgaattcaatcatcgtcatcgtttagtcgtggattatcgt
tttcaggcattgcatgaaatccgcggtgaagacatcacagaaggacaaggtaaccttctc
gattcgcctatcgagttttaccgtaatgatttgaaaaccaactacgtgtttggctctact
ggtgcgaaaggacgattcgaatttggcttaggctacagcgataaaacttaccaaaattat
cgtaacggtttacctggcaagcccaacgcaaaaactaagtacaacgacttccgcgcccca
aacgcccacgttgagttttaccttagagcgactcctaaaacctattggttagttgggacg
aaacaagtcttcaccgagtaccttaataaaaaccctcgcgctgcatcaaaagacagcgac
accggcttttactacaccggtgctgagtgggaaatatcggggaaaacccaaggtatcgca
aggcttggctatcaagttaaagactttgatagtgaacaacgagaaaccttcaaaggcttt
agctgggatatcggatttgaatggctaccacaagagcaaacgttggtgacggtcaaaact
acccaagcagccgtcaaccctgaccaagatggtgactacaacttacagactcgttatcgc
ctagatatcaaacacgattggaacagctatttagccactcgtttaggtggcatttatcaa
gaagatgattacaccggcatcacgagaaacgatgaacgatataccctttccgctggcgtt
gattatcaaattagacgctggattcaattgaaagcggattggcaatatcaagacaaaaca
tccaatcgttcaggttatagctacgaccaaaatgtctggacgttaagcgcgcaattttcg
ttgtaa
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