Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_16710
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Entry
M634_16710 CDS
T02761
Name
(GenBank) LuxR family transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M634_16710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpf03000
]
M634_16710
Transcription factors [BR:
vpf03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
M634_16710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
HTH_30
Sigma70_r4
HTH_23
HTH_40
HTH_11
HTH_24
HTH_10
DUF7342
Motif
Other DBs
NCBI-ProteinID:
AGQ92567
LinkDB
All DBs
Position
II:complement(113940..114611)
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AA seq
223 aa
AA seq
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MEHQTTRNVILITEGSLQSSLLKDVLETKLGINVLLITPENLASPFVRNRPISAIVLDYS
VITDEVFARYMEFKTPHLTGTLEILINCDKSISTDELFVWGALAGIFYTSDDIQTLQTGI
DKVLQGDMWFSRKFAQQYITHLRRHSRPINKNVPAILTKREQQIITFLSMGASNQQIAEQ
LFVSENTVKTHLHNIFKKIDVKNRVQALIWAKENISDHSIEMV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcaaactacaaggaatgtcatcttaattacggagggcagtctacagtcatct
ctcttaaaggatgttttggaaacgaagctcggtattaacgttctactgatcactcccgaa
aatcttgctagcccatttgttagaaatcgacctatatcagcgattgtcctagattacagc
gttatcacagatgaagtgtttgctcgttatatggaatttaaaaccccccatttaactgga
acgcttgaaatcctcatcaactgtgacaaatctatctcaacggatgaactgtttgtttgg
ggggcgcttgctggtattttctatacctcagacgacatacagaccttacagacgggcatt
gataaggttctccaaggcgatatgtggttcagtcgtaaatttgcacagcagtacattact
catttgcgtcgtcatagtaggccgattaataagaacgttccagcaatactgactaagcga
gaacaacagatcattacgttcttatctatgggggcctctaatcaacaaatagccgaacag
ttatttgtaagcgaaaatacagttaaaacgcatcttcacaatatttttaaaaagattgat
gtaaaaaacagagtacaagcactgatttgggcaaaagaaaatatttcagatcactctata
gagatggtttga
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