Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_16800
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Entry
M634_16800 CDS
T02761
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpf02000
]
M634_16800
Transporters [BR:
vpf02000
]
Other transporters
Pores ion channels [TC:
1
]
M634_16800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF3825
Motif
Other DBs
NCBI-ProteinID:
AGQ92584
LinkDB
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Position
II:complement(136841..138979)
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AA seq
712 aa
AA seq
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MKLTPVSAAVLSVLAASQVHAKSDVFSMEEVVVTANRIEQPVSEVAGSVAVVTSEEIEQK
GETELYDALRHEPGVSVSGGAGRPQNITIRGMTGNRIMIIRDGIRSADGFGANDNNDKVG
RDTFDLSNLESLEVVKGASSSVLGSGAIGGAVILKSKQPGEFLEDRDFYVDATGTYTGIS
NKYKGASNLAFRSGDTESLVNAAYWQGEETRNFSQDLYNRDLDGYSASYAINHFFSDEVM
VKARAELYRQDQQRLEGSSSIQKDGKWPIEDFAEDESTEEYSAYLGAELTPLDPTWFEEL
DTKVYWRHTEVITDTNRLMNSTDANGLLIKRRELEHKTFTDSAVGLRADFKQTLHASSAE
HKLAYGVEIASDYYQREDNQKVLDWTGSNASQKQPFAAARAYNIGLYFRDMIELEKWTLT
GGLRFDAHRLSPDGQNDIGGYPLKDIDSSEISPSLSISREVFENNRVYLSYDHGYRAPEY
DKAYGFVSHDFVPLTPFVIAPNMDLEAETSDSFEIGNKFDNGRAQLYVSAFYNKFQNFID
VVTTGQDNVGNYVKQYQNLHGVETYGADLSAAYAFTSSWKLSTKLGYVDGKDAEGEYVRS
ITPFEGNVGLNYQQQDFNAFATWNWAGSMDRVPSCQTSLGQKTECAKTEAWNTLDLGASY
QITKDFRLSATIINLFDKEYIRYQDVAGIADESKRYSTEPGRYFTVNAKYIF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaccccagtgtcagcggcagtactttcggtactagctgccagccaagtgcac
gccaaatctgacgttttctctatggaagaggttgtggtgacggcgaatcggattgaacaa
cctgtgtcagaagtagcaggcagcgttgcggttgtcaccagcgaagagattgaacaaaag
ggcgaaacagagctttatgatgcgctgcgtcacgagcctggggtaagtgtgtcgggtggc
gctggtcgtccacaaaacatcacgattcggggcatgacgggtaatcgcattatgatcatt
cgtgacggcattcgctctgcagacggttttggtgcgaatgataacaatgacaaagtgggc
cgcgatacgttcgatctatctaatcttgaatcattagaagtagtgaaaggggcaagctcc
tcagttttgggctctggtgccattggtggcgctgtgattctaaaatccaaacagccgggc
gagtttttagaagatcgtgacttttatgttgacgccacgggcacttatacggggatcagc
aataaatacaaaggcgcgagcaatttggcatttcgttctggcgatacggaaagcttggtc
aacgcggcttattggcaaggtgaagagacgcgtaacttcagccaagatttgtacaaccgc
gatttggatggttacagcgcgtcatacgccatcaatcattttttcagtgatgaagtgatg
gtcaaagcgcgtgccgaactctatcgacaagatcagcaacgccttgaaggttcgtcatcc
atacaaaaagatggcaagtggcctatcgaagactttgcagaagatgaatcgacagaagaa
tacagtgcatatttaggtgccgagctaacgccgcttgatccaacatggtttgaagagttg
gataccaaagtttattggcgtcataccgaagtgatcacagacaccaatcgcttaatgaac
tctaccgacgccaatggtctgttgatcaagcgccgcgaacttgagcacaaaacatttacc
gatagcgccgtcggtttgagagcggatttcaaacagacgcttcacgcctcatcggctgag
cacaagttagcgtatggcgttgagatagcatcagattactaccaacgggaagataatcag
aaagtcctcgattggacgggctccaacgcatcgcaaaaacaaccctttgccgctgcacgt
gcttacaacattgggctttatttccgtgacatgattgagctggagaaatggacattgact
ggcggtttgcgtttcgatgcgcaccgactttcacctgatggccagaatgatatcggtgga
tatccattgaaagatatcgacagttctgaaatttcaccaagtttgtcgatttctcgtgaa
gtgttcgaaaacaaccgcgtttacctctcttacgatcacggctatcgagcgccagaatac
gataaagcgtatggcttcgtaagccatgactttgtgccgctgacgccttttgttattgca
ccaaatatggatctagaggctgaaacttcggactcgtttgaaatcggtaacaaattcgat
aatggtcgagcgcaactttacgtttctgcgttttacaacaagttccaaaacttcattgat
gttgttaccacgggtcaagataacgtcggcaactacgtcaagcaataccaaaacttacac
ggcgttgaaacctacggcgcggatctttctgctgcgtatgctttcacatcgtcttggaag
ctaagtaccaagcttggttatgtggacggaaaggatgctgagggcgaatacgttcgtagc
atcacgccttttgagggcaatgttgggctgaactaccagcaacaagactttaatgcgttc
gcgacgtggaattgggctggttcgatggatcgtgtgccgagttgccaaacgtcgctcgga
caaaagactgaatgcgcaaaaacagaagcatggaacacgctcgatttgggagcaagttac
caaatcaccaaagatttccgtttgagtgcgaccatcatcaacctgttcgacaaagaatac
attcgttaccaagacgttgctggcatagcagatgagagcaaacgctactcaacggaacca
ggtcgttactttacggttaacgcgaagtacatcttttag
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