KEGG   Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_17225
Entry
M634_17225        CDS       T02761                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf02020  Two-component system
vpf02040  Flagellar assembly
vpf05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vpf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M634_17225
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    M634_17225
  09142 Cell motility
   02040 Flagellar assembly
    M634_17225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vpf03021]
    M634_17225
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vpf02035]
    M634_17225
Transcription machinery [BR:vpf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M634_17225
Bacterial motility proteins [BR:vpf02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    M634_17225
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 EIAV_Rev
Other DBs
NCBI-ProteinID: AGQ92661
LinkDB
Position
II:229084..229812
AA seq 242 aa
MLDMNPQETYTAPEEVNTPSRPIDENALLQRHQVMVKRVVNQLRVHATSHCSIEDMQQIG
LIALVEAGRRYGDIDDTHFPAFAVCRVRGAILDELRRLDWRSRKTRQQAHELNDVTRDLT
RSLGRMPTDSEIIKALGTNEQDYYNRQNAALAGEMQSLDQLMENSTDSHFGGQYDGMEHE
HIRRSLDSALGRLSKRDQLLLTLFYQHELNLHEIALVLDLTPPRICQLHKQALKQLNQLM
SS
NT seq 729 nt   +upstreamnt  +downstreamnt
atgttagacatgaaccctcaagaaacgtacaccgcaccagaggaagtgaacacaccatca
cgcccgattgatgaaaacgcacttttgcaacgtcatcaagtgatggtgaaacgcgtagtt
aaccagcttcgcgttcatgccacttcccattgcagtatcgaagatatgcagcaaattggt
cttatcgcgctggttgaagcagggcgtcgttatggagacattgacgatactcactttcca
gcgtttgcggtttgccgcgtacgtggcgcgatcttagatgagctgcgccgtttagactgg
cgctcacgtaagacacgtcagcaagcccatgagcttaacgacgtcactcgtgacctcacc
cgctcgttaggtcgcatgccaacggactcagaaatcatcaaagctctcggcaccaacgag
caggattattacaaccgtcaaaacgcggcgcttgcaggtgaaatgcaaagtctcgatcaa
ctgatggaaaacagcaccgacagccactttggtggtcaatacgacggcatggagcacgag
cacattcgtcgtagcttagacagcgcactaggccgactgtcaaagcgagatcaattgcta
ctgacgctgttttatcaacacgaactcaatttacacgaaatagccctcgtcttggatctg
acgccacctcgaatttgtcagcttcataaacaagcgctgaaacaactcaaccaattaatg
tcctcttag

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