Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_17780
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Entry
M634_17780 CDS
T02761
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf00300
Lysine biosynthesis
vpf00470
D-Amino acid metabolism
vpf01100
Metabolic pathways
vpf01110
Biosynthesis of secondary metabolites
vpf01120
Microbial metabolism in diverse environments
vpf01230
Biosynthesis of amino acids
Module
vpf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M634_17780
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M634_17780
Enzymes [BR:
vpf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
M634_17780
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGQ92757
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All DBs
Position
II:359919..361121
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AA seq
400 aa
AA seq
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MSNSLSLPTRVSQQVHTLAQQQNQPLCAYLYDLNALEEHIKQLRHVLPKNVELFYAAKAN
PSGSILKTLAPYVDGFEAASGGELTHLHQQQLDKPLIFGGPGKMLSELQQAIELDVDAIH
VESLTELQRIGAITERLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALM
LLRDFPQVSLKGFHFHLMSHQLDVERHLALMQRYFQVVKAWQQEFELGELMINLGGGMGI
NYQNPEQHFPWMEFCDKLEFLIAKEQVQDWTLRFECGRFITAACGYYVMEVLDIKQNLGE
NFVIARGGTHHFRTPAAQSHDHPFVILKSEQHHEISHPIQHAQATFVGQLCTPKDVLARN
QHVAHVDIGDYVVFTLAGAYAWNISHQNFLMHEPPIFHYF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattcactctccctaccgacacgcgttagccagcaagttcacacgctcgcacag
cagcaaaatcaacccttgtgcgcgtacttgtatgacctaaacgccttagaagaacacatc
aaacaactgcgtcacgttttgccgaaaaatgtcgagctattttacgcagccaaagccaat
ccatcgggctcgattctcaaaacgctcgcgccgtatgtcgatggttttgaagcggcatct
ggcggggagttgacacaccttcaccagcaacaactcgataagccattgatcttcggtggc
cccggaaaaatgctaagtgaattgcaacaagcgattgagcttgatgttgatgcaattcat
gtcgaaagcctcaccgagctgcaacgcattggagcaataaccgagcgcctcaaccgccct
gcttcgatctttttgcgtatgaacattgatattggcgacataacgctcagcaagttggcg
atgggcggcaagccgactccttttggtttggacgagtccgaactgagtaatgctttaatg
ttgctgcgcgatttcccgcaagtgtcactcaaaggcttccattttcacttgatgtcgcat
cagctcgatgttgaacgtcacttagcgttaatgcagcgctatttccaagtcgtgaaggcg
tggcaacaagagtttgaactcggtgagctgatgatcaacttgggcggcggcatgggcatc
aactaccaaaaccctgagcaacactttccgtggatggagttttgcgacaagttggaattc
ctcatcgccaaagagcaagtgcaagactggacactgcgttttgaatgcggacgtttcatc
acggcagcatgtggttattacgtgatggaagtgctggatattaagcaaaatcttggcgaa
aactttgtcatcgcacgcggggggactcaccatttccgcacgccagcagcgcagagccat
gatcatccattcgtcatcctgaaaagcgagcaacaccatgagatttctcacccaattcag
catgcacaagcgacctttgtcggccagctttgtacgcccaaagatgtgctggcacgcaat
caacacgtcgcccacgtcgatattggtgattacgttgtgtttaccttagcgggcgcgtat
gcgtggaacatctcccatcaaaacttcttgatgcatgaaccgccgatcttccactatttt
taa
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