Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_19210
Help
Entry
M634_19210 CDS
T02761
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpf03400
]
M634_19210
Enzymes [BR:
vpf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
M634_19210
DNA repair and recombination proteins [BR:
vpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
M634_19210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AGQ92987
LinkDB
All DBs
Position
II:663325..664869
Genome browser
AA seq
514 aa
AA seq
DB search
MRYDTVRLILGDQLNSEHSWFQQADDTVLYLIAELKQENTYVTHHIQKVCAFFSAMAIFA
QEKQEDGHHVLHLTLDDTAAFDDLDQVLQHYVREVGASKFEYQRPDEYRLLEQLTKLKLE
GVVKRCVDTEHFLLPFAEIEQQFPQGQHVMMEHFYRRMRKRFDILMQDGKPVGEKWNYDA
NNRNKLKAQDIEQLPKPLMFGLNVDDIVERLARHKISTIGSLNGDLLWPVNRAQSLSLLA
HFCQVCLPHFGRFQDAMTAEHDAKWSLYHSRLSFSMNSKLLHPKEVIDAALRAYQANKHI
DIAQVEGFIRQILGWREFIRGVYWANMPQYPQKNELEASRDLPDYFWTGKTKMACMRNAI
GQSLDYAYAHHIQRLMVTGNFCLLTEMNPDQVDAWYLGIYVDAIEWVEMPNTRGMALFAD
GGIVGTKPYAASGSYINKMSDYCKGCHYDNKARSGEGSCPFNSLYWRFMDKHEKRLATNP
RIGMIFRSWDNMEASQRQAILETAERYIADLEHL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatgacacggtgcgattgattctcggcgaccaactcaacagcgagcattcttgg
tttcagcaagcggatgataccgtgctttacttgattgctgagctcaagcaagaaaacact
tacgttacgcatcacattcaaaaggtgtgcgctttcttctccgcgatggctattttcgct
caagagaagcaagaagatgggcatcatgttctgcatctaacgttggatgacactgccgct
tttgacgatcttgaccaagtattgcagcactacgttcgtgaagtaggggcaagcaaattt
gagtatcaacggcctgatgaatatcgactgttggaacaactgaccaagttgaaattagaa
ggtgttgtcaaacgttgtgtcgacactgagcattttttactgccttttgcagaaatagaa
cagcagttcccacaaggccagcacgtgatgatggagcacttttaccgacggatgcgcaaa
cgcttcgatattttaatgcaagacggtaagccagttggtgaaaagtggaactacgatgcc
aacaatcgcaacaaactcaaagcgcaagatatcgaacaattgcccaaaccgctgatgttt
ggcctgaatgttgacgacattgttgagcgacttgcgcgacacaagatctcgaccattggg
tcactaaatggtgatttgttatggccagtgaatcgcgcgcagagcctatctttactcgcg
catttctgtcaggtttgtcttcctcactttggtcggttccaagacgcaatgacggcagag
cacgacgccaaatggagtctgtaccacagccgtttgtcgttctcgatgaacagcaaatta
ctgcaccccaaagaggtgattgatgccgcacttagagcgtaccaagcaaacaagcacatc
gacattgctcaggtagaagggttcattcgtcagatcttaggctggcgggaattcattcgg
ggtgtgtactgggcgaacatgccgcagtatccgcagaaaaatgagctcgaagcatcacgt
gatttacccgactacttttggactggaaaaaccaagatggcttgtatgcgcaatgcaata
ggccagtctctcgactatgcctacgcccatcatattcagcgtttgatggtgacgggcaac
ttttgtttgctcaccgagatgaatcctgaccaagtagatgcttggtatctcggcatttat
gtcgatgcgattgagtgggtagaaatgcccaatacacgcggtatggcattgttcgccgat
ggtggcattgttggcaccaagccttatgccgcaagcgggtcgtacatcaacaaaatgagc
gattactgtaaaggttgccattatgacaacaaggcgcgcagtggtgaaggctcttgtccg
tttaatagtctttattggcgatttatggacaagcatgaaaagcgactcgctaccaatcca
cgcatcggcatgattttccggtcttgggacaatatggaagcttcgcagcgccaagcgatt
cttgagacggctgaacgctatatcgcggatttggagcatttgtga
DBGET
integrated database retrieval system
