Vibrio pelagius: LZI70_00740
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Entry
LZI70_00740 CDS
T08558
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vpg
Vibrio pelagius
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpg03400
]
LZI70_00740
DNA repair and recombination proteins [BR:
vpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LZI70_00740
Archaeal homologous recombinant proteins
LZI70_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
AAA_21
SMC_N
nSTAND3
ABC_tran
Ribosomal_S13_N
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UTT84865
LinkDB
All DBs
Position
1:complement(182893..186630)
Genome browser
AA seq
1245 aa
AA seq
DB search
MKVLSLEFENLNSLKGRWKLDFTQSPFAENGLFAITGPTGAGKTTILDAICLALFHRTPR
LKSIAKGNNEIMTRGTGECFAEIEFEVKGKTYRSNFHQKRARNKHDGALQTPTCEFADAD
TNKVLETQLSKKIKLVESTTGLDFSRFTKSILLSQGEFAAFLNANANDRAELLEELTGTE
IYSLISERIYEHYKSSEEGLNQLKAKAEGVNLLTAEQVEELSQNKSSLEIALKQLNQELK
GWSEHLAWWRELNKAKLLLASSESELKSAQAEMEANKHQLEQLAKSEPAEKLRPLHKELH
RVQREVASLKTQLDDANKQLETGNQDKIQTETALNAQTEATNQLRKEQTELVATIEKVRP
LDQQVALLDEKLTTQKQTQSLLKAEQETKQSLIQNVEKSLEELKQKEKTLAEYLSTHESS
KSLDRYLGQWQTNVAQIRTLEQQQTQQQQRVERLANEISTQEQQVKKLTLDQQNSTQELS
ALTTAEQAAKALWEQSQQVHGEEQLNGLKHVLEAWNRQTHALTDVQRRYLMATEQAQVKR
SELERKTSENTELTKQREVLVERYKEKEQSLERLQTLIAQEGELAKYRAMLEPGSECPLC
GSTDHSVEQSQDVNALLQQQKQESEVLALVKKEGQDLRQKLDSLAPILNHLEGEIQNLTS
DAEQAKQSCALLVEKFTQTGASSSYANAELDNHTSLMEWVVTQEQIADKDAVAMFVDRCE
HELNKVTQLQQQQVQTKADYQSAEKQRINLELALKDAFNKVEALSVRIVDLQNQRLDAEE
QAIQLKQTQSSQWQSLQQSITETGNSAPELDCIDQWLDEKNAASQEWQASYQQKAELDKA
LIVHQEKHQSLASSLAEQVNKLAQLEKDLMLTSDDLTKVQQERQALFGDKQIQQQEQLMS
AKLEEATKELETLKAAFNRCELTLREWQTKQASLLKELATKQNDLTQANESWTRALSVSP
FESETEFEQALLDEQLRADLVALKQRLDNAIVSSSAKLKAANQSVDELLEHANAAKWQEV
EIEQVEQQVSDCQQQQQTTASQIGAINANLEMDKKNRENQQHLFKEIDEKQQAFDDISQL
NSLIGSKNGDKFRKFAQGLTLENLVYLANKQLQRLHGRYELKRKAEDGLELQVLDTWQGD
VVRDTKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDSDTLDIALNALDN
LNASGKMIGVISHVEALKERVPVQLKITKHSGLGVSEMSKEFKVA
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcttatcgctagaatttgagaatctaaactcactcaaaggccgttggaagctc
gattttacccaatctccgtttgctgaaaatggattgttcgccattactgggccgactggc
gcaggtaaaactacgattttagatgcaatctgtttggccttgttccaccgaacgcctcgt
ctaaagagcattgcgaaaggcaataatgagatcatgacacgcggtacgggcgagtgtttt
gctgagattgagtttgaagtgaaagggaaaacttatcgttctaatttccatcagaaacgt
gctcgtaacaagcatgatggcgcactccaaacacccacttgcgagtttgctgatgcggac
accaataaggtattagaaactcagctcagtaagaagattaaactggttgagtcgacgaca
ggtctcgatttttcccgtttcactaagtctattttgctttctcaaggtgagtttgcagcg
ttcttaaatgccaatgctaatgatcgcgctgagttgttagaagagctgacgggtactgag
atctacagtctgatctcagagcgcatctatgagcactacaaatccagtgaagaagggtta
aaccagctgaaagcgaaagctgaaggtgtaaatctgttaaccgctgagcaagtcgaagag
ctctctcaaaacaaatcgagtttagagatcgcgttaaagcagcttaaccaagagctgaaa
ggttggtcagaacatttggcttggtggcgagaactcaataaagccaagttattgctggcg
agcagtgaaagtgagttgaaatctgctcaagcggagatggaagccaataaacatcaattg
gaacagttagcgaaaagtgaacctgctgaaaagctgcgcccacttcataaagaacttcat
cgtgtgcagcgggaagtcgcgtcattaaagactcaattggatgatgcgaataaacagctt
gaaactggcaatcaagataagatccaaacggaaacagcgctcaacgcgcaaacggaagcc
acaaaccaacttcgcaaagaacaaactgagcttgtggcgaccatagaaaaagtgcgccca
cttgatcagcaagtcgctttgctcgatgaaaagctgacaactcagaagcaaactcaatca
ctgcttaaagcggaacaagagaccaaacagtctttgattcaaaacgtggaaaagtcactt
gaagagttaaaacagaaagagaaaacgctggctgagtacttatcgactcatgaaagcagc
aaatctcttgaccgctatttaggtcagtggcaaaccaatgttgctcagatccgaacgctt
gaacagcagcaaacccagcagcaacagcgagtagagcgtctcgcgaatgaaatcagcacc
caagagcagcaagtaaagaaactgacactagaccaacaaaatagtactcaagagttgtct
gcattaacgacggctgagcaagctgcgaaagcgttatgggagcagtcacagcaggtacac
ggcgaagagcagttaaatggcttgaaacacgttttagaagcgtggaaccgacaaacccac
gcgttaacggatgttcaacgtcgttacttgatggcgaccgaacaagcacaagttaagcgt
agcgagttggagcgtaagacatctgaaaacacagagctgacaaagcaacgtgaagtcttg
gttgaacgttacaaagagaaagagcagtcgctagagcgtttgcagaccttgattgctcaa
gagggtgaactcgctaagtatcgcgctatgttagagccggggtctgagtgtcctctgtgt
ggttcaacggaccattcggtcgaacaatctcaagatgtgaacgcgttgctccagcagcaa
aaacaagagtcggaggttttggctctggttaaaaaagagggacaggatcttcgtcagaag
ttggattcactcgcgccaatcttgaaccaccttgagggtgaaattcaaaacctaacttcg
gatgccgagcaagccaagcaatcttgtgcgctgttggtagagaagttcactcaaacgggt
gcaagtagttcatacgcgaatgcagaattagacaaccatacatcgttgatggagtgggtt
gttactcaagagcagattgcagataaagatgctgtcgcaatgtttgttgatcgttgtgag
catgaactgaataaagtcactcaacttcaacagcaacaagtgcaaaccaaagcagattac
caatcggcagagaaacagcgtatcaatcttgagttagcgttgaaagatgcgtttaacaaa
gttgaagcattatcagtgcgtattgtggatttgcagaaccagcgtttagatgccgaagag
caagctattcaattgaaacaaactcagtcatcacagtggcagagccttcaacaaagcatt
actgaaactggaaatagcgctcccgaattagattgcattgatcaatggcttgatgagaaa
aacgcggcgtcgcaagagtggcaagcaagctaccaacagaaagcggagctggataaagcg
ctgatcgttcaccaagagaaacatcagtctttggcttcatccttagctgaacaggtcaat
aaactggcgcagcttgagaaagatcttatgttgacctcggatgatcttactaaggttcag
caggagcgtcaggcactgtttggcgacaagcagattcaacaacaagagcagttgatgagt
gctaagttggaagaagcgactaaagagttagaaactttgaaagcggcatttaaccgctgt
gaactgacactgcgtgagtggcaaaccaagcaagcttcactcttaaaagagcttgctacc
aaacagaacgatctcactcaggcgaatgaatcatggactcgagcgttatcagtcagccca
tttgaatccgagactgagtttgaacaagctttattggatgagcagcttagagccgatctc
gttgcactcaagcaaagacttgataacgcgatagtgagtagttcagctaagctcaaagcc
gctaatcaaagtgttgacgagttgctcgaacacgctaatgcagctaaatggcaagaggtt
gaaattgagcaagtagagcagcaagtttccgattgccaacaacaacagcaaacgacagcg
agtcaaatcggtgcgattaacgcaaaccttgagatggacaagaagaatcgcgagaatcag
caacacttgttcaaagagattgatgaaaaacagcaagcgtttgatgatatttcgcagttg
aactcattgattggctcaaagaatggcgacaagtttagaaagttcgcgcaagggttaacc
ctcgagaacctggtttaccttgctaacaagcaactgcagcgcctgcacggtcgttatgag
ttaaaacgcaaagcggaagatggactagagttgcaagtgctggatacgtggcagggcgat
gtggtccgagataccaaaacgctctctggtggtgaaagcttcttggtgagtcttgctttg
gcattagcgctgtctgatttggtgagccacaaaaccagtattgattcgctgttcctcgat
gagggctttggtactctggatagcgacacgttagatattgctctaaatgcgctcgataac
ttgaatgcatctggcaagatgatcggtgtgatcagtcacgtcgaggcgttaaaagagcga
gtccccgtccagctcaaaatcactaagcattctggtttgggtgttagtgagatgagtaaa
gagtttaaggtcgcatag
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integrated database retrieval system
