Vibrio pelagius: LZI70_01835
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Entry
LZI70_01835 CDS
T08558
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vpg
Vibrio pelagius
Pathway
vpg00630
Glyoxylate and dicarboxylate metabolism
vpg00680
Methane metabolism
vpg01100
Metabolic pathways
vpg01120
Microbial metabolism in diverse environments
vpg01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LZI70_01835 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
LZI70_01835 (fdhF)
Enzymes [BR:
vpg01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LZI70_01835 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Fer2_4
Pyr_redox
Pyr_redox_3
NAD_binding_8
Fer4_7
Fer4_9
Fer4
Fer4_6
Thi4
Fer4_10
FAD_oxidored
DAO
HI0933_like
NAD_binding_7
GIDA
Fer4_2
Fer4_8
FAD_binding_3
FAD_binding_2
Fer4_18
Amino_oxidase
Fer4_16
Fer4_15
Fer4_4
Fer4_3
AlaDh_PNT_C
Lys_Orn_oxgnase
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
UTT85064
LinkDB
All DBs
Position
1:complement(475383..479609)
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AA seq
1408 aa
AA seq
DB search
MIQIVIDGKYRIVEQGQTVLEAANTCGVDIPSLCGLNRSGEKIPCDLCVVEVESEGMQRA
CELEVYQGLTVNTQSEQISQHRHRALNRIMSDHYADCEAPCQTACPAGVDIQSYLHHIAQ
NDSLKAIEVIKQTLPMPLSIGRVCPAFCETECRRNLVDDSIAIRQLKRHAADIDLEAQQS
YTPPKKPDNGKRVAIVGGGPGGLTAGYYLANEGYQVVVYESMPKAGGWLRYGIPEYRLPK
SILDKEIELMCRNGMVIECDKKLGEDFSLSSLSQGFDAVCLAVGASSAVEMNYTGSDLEG
CYLGVDYLKDYVTDKQYTTGKKVAVIGGGNTAIDCARTAVRAGAETKLIYRRTRDEMPAE
DYEIEEAEHEGVKFHFLTNPAENLADEDGRVKAIRLERMELGAPDASGRRSPKATGEFFT
EAFDTVIAAVSQKPDLSFMTDELLEIPLTRWNTADADPDTMHTGVGNIFSIGDFRRGPAT
AVEAVGDGRIVAQAIDRFFSGTMTQLPVKPFNSRKEKQLKAVERQQYQAIQSVARKIMPE
LSAEQREQSFDEVELGFTNADAIEEAQRCLECGCQANTRCDLRDYATEYQAVQTFNDYKV
DVTDDAVWQAVKAKQGNSSQQPRHKFEVDSSSEFIVFDANRCISCGQCIQACREQNVHGV
LSFMCAQNGKPSSRPELRPNFGPNQTRMGDSNCVQCGACVQACPTGAMVDARYKQQGSVE
QLKKVDTICTYCGVGCKLTMHVDESANKIRYVEGANSPVNEGMLCVKGRFGFDFVASDER
LTTPLIRKDGWLQPASWDEAIRLVADKFSAIKKGVGSQALAGFSSAKTTNEDNYVFQKFI
RRELGTNNVDHCARLCHASTVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTTSAHPII
GSHIKQAVRHGGARLIVADPKRIDIADHAELYLAHRPGTDVMLLNGVMQQIIKHGWYDQE
YIEERVDGFDTLLQEVMSPSYSLEKVELVTGVKAEDIFAMARLIGTAERTAVYYSMGITQ
HTTGHDNVRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNNLPGYQKVYNPL
VRKKFEMEWDVAELPAESGLTLTEIIDGACKREVRGLYVMGENPVLSDPNQAHVIEGLEA
LDFLVVQDIFLTETAQYADVVLPSCSFAEKSGHFTNTERRVQRINPAVKPPGEAKEDWAI
IQMLANAMGSDWQYQSVADITNEIARVTPQYGGLRWENITTYGIQWPSNKNNPDGTRIMH
QTQFTRGRGQMEAIPFRYAAELPDEEYPLVLTTGRILEQFHTGTMTRKTQGLDNLAGPRA
MISVHDAEALNINNGQMLKVSTRRGEIEIAAFVTKRMQKGVVFIPFHFVESPVNRLTTTA
TDPHAKIPEFKVAAVKVEPVFKEQSIHA
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgattcagattgtgattgatgggaaataccgcattgtcgagcaggggcaaacagtgctc
gaagctgcgaatacatgtggcgtagatatcccatcgttatgtgggttgaaccgctctggt
gaaaagatcccttgtgacctttgcgttgttgaggttgaaagtgagggtatgcaacgagct
tgtgaactggaagtctaccaaggtttaaccgttaacacgcaatctgagcaaatcagtcaa
catcgccatcgcgcgctaaatcgaatcatgtctgatcactacgccgattgtgaagcaccg
tgccagacggcttgtcctgctggcgtagatatccaatcttacctgcatcacatcgcgcaa
aacgattcgttgaaagcgatagaggtcatcaaacaaaccttacctatgccattgtcgatt
ggccgcgtatgcccagctttttgtgaaactgaatgtcgccgcaacttagtggacgattca
atcgcgatacgtcagttaaagcgccacgctgcagatatcgacttagaagcgcaacaaagc
tacacgcccccgaagaaaccggacaatggaaagcgagtcgcgattgtgggaggtgggcct
ggtgggttgacggcaggctactatttggcgaatgaaggctatcaagttgttgtctatgaa
tcgatgcctaaagcgggtggttggctgcgttatggtattcctgagtaccgtctaccaaaa
tcgattctagacaaagaaattgagttgatgtgccgcaatggaatggtgattgaatgcgat
aagaagttgggtgaagacttttcgctgtcgagtttatcgcaaggttttgatgccgtttgt
ttagcggttggcgcttccagtgcagtagagatgaattatacggggagcgatttagagggt
tgttacctcggtgtcgactatctaaaggattacgtcactgacaagcaatatacaactggc
aaaaaagtggcggttatcggtggtggtaacaccgcgattgattgcgctagaaccgccgtc
agagcaggtgctgagacaaaacttatatatcgtcgtactcgagacgagatgccagcagaa
gattatgaaatcgaagaagctgaacacgagggtgttaaatttcactttttgaccaatcct
gcagaaaatctcgcagatgaagatggccgtgtcaaagcgattcgtctagagcgaatggaa
ctcggggcaccagatgcttcagggcgacgtagcccgaaagcaaccggagagtttttcaca
gaagcatttgacacagtgattgcagcggtatcccaaaagccagacctgagcttcatgact
gatgagcttttagaaattccacttactcgttggaatacagcggatgccgaccccgatacc
atgcacacaggtgtgggcaatatcttcagtattggagatttcagacgcggccctgcaaca
gcggttgaggcggtgggagatggtcgtattgttgcacaggcgattgaccgtttctttagc
ggcactatgacacagttaccagtgaagcctttcaattcacgcaaagagaagcaattaaaa
gcagttgaacggcaacaatatcaagcgattcaaagtgtcgcccgaaagattatgcctgag
ctaagcgcagagcagcgtgaacaaagcttcgatgaagttgaactcggtttcaccaacgct
gatgcgattgaagaagcgcaacgttgcctagagtgtggttgccaagcgaacactcggtgt
gacctgcgagactacgcgacagaataccaagccgtgcaaacattcaatgattataaggtc
gatgttacggatgatgcggtctggcaagcagtaaaagctaagcaagggaatagtagccag
caaccaagacataagtttgaagtggattcgagttcagagttcatcgtctttgatgccaat
cgatgtatcagctgtggtcagtgcattcaagcttgtcgagagcaaaatgttcatggtgtt
ttaagcttcatgtgtgcacaaaatggcaagccaagctctagaccagagcttagaccgaat
tttggtccgaatcagacgcgaatgggcgactctaactgcgttcagtgtggcgcttgtgtt
caagcgtgccctacgggtgcaatggtagatgccagatacaaacagcaaggctctgtagaa
caactaaaaaaagtcgataccatctgcacctattgcggtgtgggttgcaagctcactatg
catgttgacgagtcggcgaataagattcgttacgtagaaggggctaactcgccagtcaat
gaaggaatgctgtgtgtgaaagggcgctttggttttgatttcgttgctagtgacgagcga
ctgacaacacctttgattcgtaaagatggttggttacagcctgctagctgggatgaagcc
attcgtttggtcgccgataagttttccgctattaagaaaggggttggcagtcaggcgcta
gcgggcttctcttcagcaaaaaccaccaatgaggacaactacgtctttcaaaaattcata
cgtcgagagctaggcacgaataatgtcgatcactgtgcacgcctttgtcacgcttcgacc
gtcactgggcttgaagcgtcactgggcagtggtgcaatgactaatgatattccgagtatc
aaacactccgatgttatctttattatcggctcggatactacatcggcacaccctatcatt
ggctctcacattaagcaggctgtgcgacatggcggcgcacggctgattgtggctgatcct
aagcgcattgatattgccgatcacgccgagctttatctagcgcataggccgggcactgac
gttatgttgcttaatggcgtaatgcagcagatcattaaacatggctggtacgatcaagag
tatatcgaagagcgggtcgatggctttgacaccctattgcaagaggtgatgtcgccaagc
tattcgctggaaaaggtagagctcgtaaccggcgttaaagcagaagatatttttgcgatg
gcgcgattgataggcacagctgaacgtacagctgtctattactcaatgggcattacccag
cacacgacaggacacgataacgttcgctcgatagccaatttgcagttgctgtgtggcaac
attgggattgagggaggcggcattaatccgctgcgtggtcagtcaaacgtgcagggggct
tgtgacatgggagcgttgccaaacaatctgccgggttatcaaaaggtctacaacccactg
gttcgtaagaaatttgagatggagtgggatgttgctgaactgcctgctgagagcggttta
acactgactgaaatcattgatggtgcgtgcaagcgtgaagttcgtggactgtacgtgatg
ggggaaaacccagtattgagtgatccaaaccaagcccatgtgattgaaggtcttgaagca
ctcgattttctggtggtacaagatatcttcttgaccgaaacggctcaatacgcagatgtt
gtcttgccgtcatgctcgttcgcagaaaaatctgggcatttcactaatacggagcgtcgt
gtgcagcgtatcaaccctgcggtaaaaccgccaggtgaggcgaaagaggattgggcaatc
attcaaatgctggcgaatgcgatgggcagcgattggcaatatcagtcagtcgcggatatt
accaatgagatcgctcgtgtcacgccacaatatggcggattacgttgggagaacattaca
acctacggcattcaatggccgagtaacaagaacaaccctgatggcactcgtattatgcac
caaactcagtttacacgtgggagagggcagatggaggcgattccatttagatacgctgca
gagttgccagacgaagagtatcctctagtactaactacaggacgtatccttgagcaattc
catactgggactatgactcgcaaaacccaagggttggataatttggcggggcctagagca
atgatcagtgtgcatgatgctgaggcgctcaatatcaacaatggtcagatgctgaaggta
tcaacacgtcgtggcgaaattgagatcgctgcatttgttactaagcgtatgcagaaaggt
gtagtgtttattccgtttcactttgtggagtcaccagtgaatcgtctcacaacaacagca
acagacccacatgcgaagatccctgagtttaaagtcgcagctgttaaggtcgagcccgta
ttcaaagagcagagtattcacgcgtga
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integrated database retrieval system
