Vibrio pelagius: LZI70_03235
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Entry
LZI70_03235 CDS
T08558
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vpg
Vibrio pelagius
Pathway
vpg00541
Biosynthesis of various nucleotide sugars
vpg01100
Metabolic pathways
vpg01250
Biosynthesis of nucleotide sugars
Module
vpg_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LZI70_03235 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpg01005
]
LZI70_03235 (kdsA)
Enzymes [BR:
vpg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
LZI70_03235 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vpg01005
]
Lipid A
LZI70_03235 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
UTT85932
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Position
1:complement(779364..780215)
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AA seq
283 aa
AA seq
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MEQKTVHIGDMPIANDKPFTLFAGMNVLESRDLAMQICEHYVKVTEKLGIPYVFKASFDK
ANRSSVHSYRGPGMEEGLKIFQELKDTFGVKIITDVHTEAQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFMSPGQVGNIVDKFAECGNENIILCERGSCMGYDNLVVD
MLGFGVMKKASNGSPIIFDVTHSLQMRDPSGAASGGRREQTVELAKAGLATGIAGLFIEA
HPNPDQARCDGPSALPLDKLEPFLAQMKALDDLIKGFDHIDIK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaaacagttcacattggcgatatgccaattgcaaacgacaagccatttacg
ctatttgcaggtatgaatgttcttgagtctcgcgatctagcgatgcagatctgtgaacac
tacgtaaaagtgactgagaagctaggtatcccttacgtatttaaggcgtcttttgataaa
gcgaaccgcagctctgtgcactcttaccgtggtccaggcatggaagaaggtcttaagatt
ttccaagaacttaaagacacgtttggcgtgaaaatcatcacggatgttcatactgaagct
caagcacagccagtcgcagacgttgttgatgtgattcagcttcctgcgttcctagctcgt
caaactgaccttgttgaagcgatggcgaaaacaggcgctgtaattaacgtgaaaaagcca
cagttcatgagccctggtcaagttggcaacatcgttgataagtttgctgagtgtggcaac
gagaacatcatcctttgtgagcgtggctcgtgtatgggttacgacaacttggttgttgat
atgcttggctttggtgtgatgaaaaaagcatcaaacggtagcccgattatcttcgacgtg
actcactcactgcagatgcgtgacccttcaggcgcggcatcaggcggtcgtcgtgagcag
actgttgaacttgcaaaagcgggtttagcgacaggtatcgctggtctgtttattgaagcg
cacccgaacccagatcaagcacgttgtgatggtccgtcggcactaccattggataagcta
gaaccattcctagcacaaatgaaagcacttgatgatttgatcaaaggtttcgatcatatc
gacattaaatag
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