Vibrio pelagius: LZI70_04495
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Entry
LZI70_04495 CDS
T08558
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vpg
Vibrio pelagius
Pathway
vpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LZI70_04495 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpg03019
]
LZI70_04495 (rppH)
Messenger RNA biogenesis [BR:
vpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LZI70_04495 (rppH)
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Paralog
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UTT85541
UniProt:
A0ABY5G738
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Position
1:complement(1050049..1050567)
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AA seq
172 aa
AA seq
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MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDEGETPEQAMYRELYEEVGL
TKKDVKIVATSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRLDCDESRINMQRGSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRAMKEFASLAMPFKERKTKGKRKQRRG
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatggcgatggttaccgattaaacgttggtattgtaatctgtaacaaccatggt
caggtcttctgggctaaacgatacgggcaacattcatggcaattccctcaagggggaatc
gatgaaggtgaaactccggagcaggcaatgtaccgtgagttatatgaagaggttggcctt
accaaaaaggatgtaaagatcgtcgcaacaagtcgtcattggttacgctataagctaccc
aaacgactggttcgatgggattcaaaacctgtctgtattggacaaaaacagaagtggttt
cttctgcgtttagattgcgatgagtcgcgtattaacatgcaacgtggaagtacacctgaa
tttgatggttggcgttgggtaagttactggtaccctgttcgacaagttgtttctttcaag
cgagacgtataccgccgtgcaatgaaagagttcgcttctttagctatgccatttaaagag
cggaaaacaaaaggaaaacgcaaacagcgtagaggttaa
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