Vibrio pelagius: LZI70_04775
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Entry
LZI70_04775 CDS
T08558
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vpg
Vibrio pelagius
Pathway
vpg00470
D-Amino acid metabolism
vpg00550
Peptidoglycan biosynthesis
vpg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LZI70_04775 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LZI70_04775 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpg01011
]
LZI70_04775 (murD)
Enzymes [BR:
vpg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LZI70_04775 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vpg01011
]
Precursor biosynthesis
Amino acid ligase
LZI70_04775 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
DAO
3Beta_HSD
NAD_binding_9
NAD_binding_8
HcgC
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UTT85594
LinkDB
All DBs
Position
1:complement(1125219..1126535)
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AA seq
438 aa
AA seq
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MEPWQNLQNVVVVGLGITGLSVVKHLVKYQPHCTVRVIDTRDNPPGKESLPDGVALHSGS
WQNEWLAQADLVVANPGIALATPEIQTVLARGGAVVGDIELFAWAVEKPVVAITGSNGKS
TVTDLTGVLAKAAGLKVGVGGNIGVPALDLLEQDADLYVLELSSFQLETTSSLKLAAAAF
LNLSEDHMDRYQGMADYCDAKRRIFKHAQYALVNRDDRETYPLDSQQVVSFGFDNQEFGV
DVIDGEEWLVDHGAPVIRTQDLTLVGRHNVSNALVCLALLKLANIDYTNSLDALKAYNGL
THRCQVVADKRDVKWVNDSKATNVASTLAALSGLECAGTLYLLVGGVGKGADFSELAPVL
NNIARVQLCCFGEDADQFMPLHSSAQKFDTMQQIIETVSPQLVAGDMVMLSPACASFDQF
SNFMARGDAFTELAQKYA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaaccttggcaaaatcttcaaaatgtagtggttgtagggctcggtattaccgggctc
tctgtcgttaaacatcttgtaaaatatcaacctcactgcacggtgagagtgatcgacact
cgcgataatccaccgggcaaagagtcactgccggatggtgttgctctgcattctgggagc
tggcaaaacgagtggttggcacaagccgaccttgtggtggcaaaccctggtatcgcactg
gcaacaccagagatccaaacggtgttggcgcgcggcggtgctgttgtgggtgatattgaa
ttgttcgcttgggcggttgagaagcctgtcgtggcaatcacgggctctaacggtaaaagc
acagtgacagatcttacgggtgtacttgccaaagctgctggtcttaaggtgggcgttggt
ggcaatatcggtgtccctgcattggatctacttgaacaagatgccgacctctatgtgtta
gaactgtcgagttttcaattggagaccacatccagccttaaattagcggcagcggcgttc
ttgaacctctctgaagaccatatggatcgctatcaaggcatggccgactactgtgatgct
aagcgccgtatcttcaaacatgcgcaatacgctctagtaaaccgtgatgatcgcgaaacc
tatccgctcgattcacaacaggttgtaagctttggttttgataaccaagagttcggcgtt
gatgtgattgatggcgaagagtggcttgttgatcatggcgcacccgttattcgcacccaa
gacctcactctggttggtcgacacaatgtatcaaatgctctggtttgtttggcactactg
aaactggcaaacatcgactacaccaacagtcttgatgcattgaaagcatataacggcctg
acccatcgttgccaagtcgtcgcagacaaacgcgatgtgaagtgggttaacgactctaaa
gcaaccaacgttgccagcactttggcggctttgtcaggtctagagtgcgcaggaacactc
tatttgttagtcggtggtgtgggtaaaggggcagacttcagtgagcttgcaccggtactc
aacaatatcgcccgcgttcaattgtgctgttttggtgaagatgctgaccagtttatgcct
ctgcattcatcggcacaaaagtttgacaccatgcagcagattattgaaaccgtctcacca
cagctggtggctggagatatggtgatgttgtctccggcgtgtgcaagcttcgatcagttt
agtaatttcatggcaaggggtgatgcattcaccgagcttgctcaaaagtacgcttaa
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