Vibrio pelagius: LZI70_05780
Help
Entry
LZI70_05780 CDS
T08558
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vpg
Vibrio pelagius
Pathway
vpg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LZI70_05780 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpg03019
]
LZI70_05780 (orn)
03009 Ribosome biogenesis [BR:
vpg03009
]
LZI70_05780 (orn)
Messenger RNA biogenesis [BR:
vpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LZI70_05780 (orn)
Ribosome biogenesis [BR:
vpg03009
]
Eukaryotic type
Pre-60S particles
RNases
LZI70_05780 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UTT85752
UniProt:
A0ABY5G7C7
LinkDB
All DBs
Position
1:complement(1344805..1345350)
Genome browser
AA seq
181 aa
AA seq
DB search
MSFSDQNLIWVDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQPDSELDKMDE
WCTNTHTGSGLVKRVKESTVTEQDAIAQTIEFLEKWVPKGKSPICGNSIGQDRRFLYKHM
PELEEYFHYRYIDVSTLKELTRRWKPEVLDGFTKSGSHLALDDIRESIAELQYYRKTIIN
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttagcgatcagaacctaatatgggttgatctagagatgacgggacttgatcct
gaaactcataaaatcattgaaattgctactatcgtcaccgatagtgagctgaacattctt
gctgaaggcccagtattagctatccaccaaccagacagcgagctggacaaaatggatgag
tggtgtacgaatacgcataccggtagtggcttagtgaaacgtgtgaaagagagcactgtg
acggaacaagacgcgattgctcaaacgatcgagtttcttgaaaagtgggtaccgaaaggc
aaatcgccgatttgtggcaacagtattggtcaagatcgtcgtttcttgtacaagcatatg
cctgaactggaagagtacttccactaccgctacatcgacgtaagcaccttgaaagagttg
acgcgtcgttggaagccggaagtattagatggctttactaagtctggtagccacttagcc
ttagatgacattcgcgagtcgattgctgaacttcagtattaccgcaagacgatcatcaat
atctaa
DBGET
integrated database retrieval system
