Vibrio pelagius: LZI70_06505
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Entry
LZI70_06505 CDS
T08558
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vpg
Vibrio pelagius
Pathway
vpg03030
DNA replication
vpg03410
Base excision repair
vpg03420
Nucleotide excision repair
vpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LZI70_06505 (polA)
03410 Base excision repair
LZI70_06505 (polA)
03420 Nucleotide excision repair
LZI70_06505 (polA)
03440 Homologous recombination
LZI70_06505 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpg03032
]
LZI70_06505 (polA)
03400 DNA repair and recombination proteins [BR:
vpg03400
]
LZI70_06505 (polA)
Enzymes [BR:
vpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LZI70_06505 (polA)
DNA replication proteins [BR:
vpg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LZI70_06505 (polA)
DNA repair and recombination proteins [BR:
vpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LZI70_06505 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LZI70_06505 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UTT85959
LinkDB
All DBs
Position
1:complement(1502910..1505714)
Genome browser
AA seq
934 aa
AA seq
DB search
MARIPDNPLILIDGSSYLYRAFHAYPGTMSNGDIPTNAIYGVVNMLRSMMRQFASDRIAV
VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISIPGVEADDVIGT
LASQASKAGMPVLISTGDKDMAQLVDDNVTLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGSIEKLYQNLDDIAALGFRGSKTMAKKLVDNE
ENAKLSYELATIKLDVELEETPESLVKGAPNVDELIKLYGQLVFKSWLNELLEGGTGVVE
ADEKSGAAGAARSVAPTSSSVEVNTSAVTIDRSKYETILNEEDFSAWLEKLKAAEVFAFD
TETDSLDYMVANLVGLSFATEEGVAAYVPVAHDYLDAPAQLDRDWVLEQLKPILEDDTQA
KVGQNLKYDASVLARYGIEMKGIKHDTMLASYVFNSVGGKHDMDSLALRFLQHSCISFEQ
IAGKGKKQLTFNQIELGEASPYAAEDADVTLRLHNRLMQHIEQDEKLKAIYEEIEVPLVP
VISRIERTGVFVDDMLLGAQSQEIAARLDELEQKAYEIAEQEFNMNSPKQLQAILFEKMG
LPVVKKTPSGAPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINAETGRV
HTSYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPHGWKILAVDYSQIELRIMA
HLSGDKALLEAFQQGKDIHAATAAEIIGVSIDDVTSEQRRRAKAVNFGLIYGMSAFGLAK
QLGIPRGEAQHYMDTYFERYPGVMQYMEDTRSAASEQGFVETIYGRRLHLPEIKSRNGMR
RKAAERAAINAPMQGTAADIIKKAMLLVDEWIQAEGAGRVKLLMQVHDELVFEVEESALA
EIESKVQELMESAAELDVPLVAEAGHGDNWDQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtattcctgataatccattgattttgattgatggctcttcttacctctatcgc
gcgttccatgcttacccgggcaccatgagtaatggtgatattcccactaacgctatttat
ggtgtggtgaacatgctacgcagcatgatgcgtcaattcgcttcagatcgcattgccgtt
gttttcgatgctaagggcaaaacgttccgtgatgatatgtatccagaatataaagccaat
cgcccgcctatgccggatgatctgcgttgccagattgagcctctgcacaatgtgattcgt
gcaatgggtctgccattgatctcaatcccgggcgtggaagcggatgatgttatcggtacg
ttggcgtcacaagcatccaaagcgggtatgccagtactgatcagtaccggtgataaagat
atggctcagttagttgatgataacgttacgctgatcaacaccatgacgaatgtggtgatg
gatcgtgaaggcgttatcgagaagttcggtattccaccagagctgatcatcgactacttg
gcactgatgggcgataaagtggataacatccctggtgtaccgggtgtcggcgataaaacg
gcgacagcgctacttcagggtataggtagcatcgaaaagctgtaccaaaatttagacgac
atcgcagcacttggattccgtggttcgaaaactatggctaagaagctggttgataacgaa
gagaatgccaagctttcttacgagctagcgaccatcaaattggatgttgagctagaagag
acaccggagtccttagttaaaggggcgccaaatgtagacgagctgatcaaactgtatgga
caactcgtgtttaagtcgtggttgaatgagctgttagaaggcggcactggtgtggttgag
gctgatgagaagtctggtgcggctggcgctgcacgctctgtagcaccaacgtcatcaagt
gtagaggtgaacacttcagctgtgactattgatcgcagcaagtacgaaacgattctgaat
gaagaggacttcagtgcttggctagagaagctaaaagcagcggaagtgtttgcctttgat
acggaaacggacagccttgactacatggtggcgaatctagtcggtttatcgttcgcgaca
gaagagggcgttgccgcttacgtacctgtggcacatgactacctagacgcgccagcacag
ctggatcgtgattgggtactggaacagctgaagccgattttagaagacgatactcaagcc
aaagtcggtcagaaccttaagtacgatgcgtctgtacttgcgcgctacggcattgagatg
aagggcattaaacatgacaccatgttggcatcttacgttttcaacagcgtaggtggtaag
cacgacatggatagccttgcgctgcgtttcctacaacacagctgcatctcattcgagcag
attgcaggcaagggcaagaagcaactgacgtttaaccagattgaactgggcgaggcctct
ccttacgcagctgaagacgcggatgtcaccctacgtctgcacaatcgtttgatgcaacac
atcgagcaagatgaaaagctaaaagcgatttacgaagagattgaagtgccattggtaccg
gtgatctctcgcattgaacgcacaggtgtctttgtcgatgacatgctgctaggtgcacag
tcgcaagaaattgccgcgcgtcttgatgagcttgagcagaaggcttacgaaatcgccgag
caagagttcaacatgaactcaccaaaacagctgcaagcgattctattcgaaaagatgggt
ctacctgtggtgaagaagacgccatcgggcgccccatcgaccaatgaagaagtgctgcaa
gagctggctctggattacccactgccgaagttgattctggaataccgtggtttggctaag
cttaagtcgacttacacagacaagctaccgaagatgattaatgcagagacaggtcgcgta
cacacctcttaccaccaagcggtaacggcgacaggtcgtctatcttcgacagatccaaac
ctacagaacattccaattcgcaacgaagaaggacgtcgtattcgtcaggcatttgtcgcg
cctcacggctggaagattcttgcagtcgattactctcagattgaactgcgtatcatggcg
cacctatctggcgataaagcgctacttgaagccttccaacaaggtaaagatatccacgcc
gcaacggcagctgagatcatcggcgtgagcattgatgatgtgacttcagagcagcgtcgt
cgcgcaaaagcggttaactttggtcttatctacggtatgagtgcctttggccttgcgaaa
cagttaggtattcctcgtggtgaagctcagcactacatggatacttactttgagcgttac
cctggcgtaatgcagtacatggaagacacccgcagtgcggcttctgagcagggctttgtt
gagacgatttacggtcgtcgtctacatctaccagaaattaaatctcgtaacggtatgcgt
cgtaaggcagcggagcgtgcggcgatcaacgcaccaatgcaaggtactgcggctgacatc
atcaagaaagcgatgctgttggtggatgagtggattcaagctgaaggcgcgggtcgcgtg
aagctactgatgcaagtacacgatgaactggtgtttgaagtagaagagtcagcattagcg
gaaattgaaagtaaagtacaagaattgatggaatcagccgcggagctagatgtccctctg
gttgcggaagctggccatggtgacaactgggatcaggcccactaa
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