Vibrio pelagius: LZI70_07115
Help
Entry
LZI70_07115 CDS
T08558
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vpg
Vibrio pelagius
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpg03009
]
LZI70_07115 (rsmB)
Enzymes [BR:
vpg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LZI70_07115 (rsmB)
Ribosome biogenesis [BR:
vpg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LZI70_07115 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
Methyltransf_25
Methyltransf_37
Methyltransf_5
Methyltransf_31
MTS
TRM5-TYW2_MTfase
TrkA_N
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
UTT83523
UniProt:
A0ABY5G030
LinkDB
All DBs
Position
1:complement(1635330..1636610)
Genome browser
AA seq
426 aa
AA seq
DB search
MNVRAAAANVLFQVVDKGHSLSHALPAAQKTIRPRDHALLQEICYGALRYLPRLESIANQ
LMDNPLKGKKRVFHHLILVGIYQLSFMRIPSHAAVGETVEATKTLRGQNLSGLINAVLRN
YLRDQEALDEAAASHNAGKYGHPSWILKMLQESYPDQWEQLVEANNSKAPMWLRVNRQHH
TRDEYAELLKNENIEYTLHSQAADAIKLSAPCDVTLLPGFDKGWVSVQDAAAQLSVDYLT
PKDGELILDCCAAPGGKTAHILEHTNDTEVVAIDADAKRLDRVYDNLERLQLRADVICGD
ARYPQEWWSGEQFDRILLDAPCSATGVIRRHPDIKWLRRASDIEALAELQSEIMDAMWGQ
LKPGGTMVYATCSITPQENVLQVKAFLERTSNATLVGSDIEQPGRQILPSEEDMDGFYYA
VLVKQA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcgcgctgctgctgccaatgtcctattccaagttgtcgataaaggccactct
ctttcacacgctctacctgcggctcagaaaacaatccgcccgcgagaccatgctctactg
caagagatatgttacggcgctctacgctacctcccacgcttagaatctatcgccaaccaa
ttgatggataatccgttaaagggcaagaaacgtgtttttcaccacctaattctggtcggt
atttaccagctgagcttcatgcgtattccttcgcacgcggcggtcggtgaaacagttgaa
gcaaccaaaacactgcgtggacaaaacctcagcggcctgatcaatgcggtattgcgtaac
tacttacgcgaccaagaagcattggatgaggcggcggcgagccacaacgctggcaaatac
ggacacccaagctggatcctaaaaatgctgcaagagagctacccagatcagtgggagcaa
cttgtagaagcgaacaacagcaaggctccaatgtggctacgtgtaaaccgtcagcaccac
actcgtgatgagtacgccgagctacttaaaaacgaaaacattgaatacaccctgcactca
caagcagcagatgccataaaattatctgcaccttgcgatgtcactctgctaccaggcttt
gataagggttgggtatcggtacaagatgccgctgcgcaattgtcggttgattacctgaca
cccaaagacggtgaactaatcctagactgctgcgctgcaccaggtggtaaaacagcacac
atccttgagcacactaacgatactgaagtggttgcgatcgatgctgatgctaaacgccta
gaccgcgtttacgacaacctagagcgccttcaactacgtgccgacgtaatctgtggtgat
gcacgctacccacaagagtggtggagtggcgaacagtttgaccgtatcctacttgatgca
ccatgttcggcaacgggcgttattcgtcgtcaccctgatatcaagtggctgcgtcgagct
tctgatattgaggctctagcagaactgcaaagcgaaattatggatgcgatgtgggggcaa
ctgaagcctggtggcactatggtgtatgcgacttgctcaatcacaccacaagaaaacgtg
ctgcaagtaaaagcgttccttgagcgcacaagtaacgcaactcttgtcggctccgatatc
gaacaaccaggtcgtcaaattttacctagtgaagaagatatggatggtttctactacgca
gtgttagtaaaacaagcgtaa
DBGET
integrated database retrieval system
