Vibrio pelagius: LZI70_07240
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Entry
LZI70_07240 CDS
T08558
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vpg
Vibrio pelagius
Pathway
vpg00730
Thiamine metabolism
vpg01100
Metabolic pathways
vpg01240
Biosynthesis of cofactors
Module
vpg_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LZI70_07240 (thiC)
Enzymes [BR:
vpg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LZI70_07240 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UTT83538
UniProt:
A0ABY5G047
LinkDB
All DBs
Position
1:1655708..1657648
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AA seq
646 aa
AA seq
DB search
MSNRKQARLEAKQFIETLSVQPYPNSTKVYVEGSRADIRVPMREISLADSLIGGTKEAPI
FEPNEPIRVYDTSGVYTDPEHEIDLYNGLPKLREGWIEERADTELLDDVSSVYTKERLED
ETLDDLRYGNLPRIRRAKDGQCVTQMHYARKGIITPEMEYIALRENMGRAQYRDEVLTQQ
HPGQSFGANLPKDITPEFVRREVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWATRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTNFREICEICAKYDVALSLGDGLRPGSVADANDEAQFAELRTLGELTKIAW
EYDVQVIIEGPGHVPMHMIKENMDEQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAGDLAKGHPGAQVRDNALSKAR
FEFRWEDQFNLSLDPETARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDT
EQVAADQAISIKMLDDPLEGMRQKSQEFRETGSELYHPAATAEVAD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcgcaagcaagcgagactggaagcaaaacagtttattgaaactctctcggta
caaccgtatccaaattcaaccaaggtttacgttgaaggctctcgtgccgatattcgtgtc
cctatgcgcgaaatctctttagccgatagcctaataggtggcaccaaagaagcgccgatc
tttgagccgaatgagcctattcgcgtttatgacacttcgggtgtctacacagacccagag
catgaaatcgatctttataacggcttaccgaagctgagagaggggtggattgaagagcga
gccgataccgaactactcgatgacgtgagctcggtttacaccaaagagcgcctagaagat
gaaaccttagatgatcttcgttacggcaatctaccacgtattcgacgtgctaaagatggc
caatgtgttactcaaatgcattatgctcgtaaaggaatcattaccccagaaatggaatac
atcgctctgcgagagaacatgggaagagctcagtaccgtgatgaagtattaactcagcaa
catccaggtcaaagctttggggctaacctgcctaaagacattactcctgaatttgttcgc
agagaggtcgctgaaggtcgcgcaattatcccttccaatatcaaccacccagaatctgaa
ccaatgatcattggtcgaaacttcctggtaaaggttaatgcaaacatcggcaactcttcc
gtgtcatcttctattgaggaagaggttgagaagctagtatgggcaactcgttggggtggc
gataccgtgatggatctctctactgggcgaaacattcatgagacgcgcgaatggatactg
cgtaatagcccagtgccgattggtacggttcctatgtatcaagctctagaaaaggttaat
ggtgttgctgagaacctaaactgggaagtgatgcgtgatactttgattgaacaggctgag
cagggtgttgactactttacgattcatgccggcttactacttcgttatgtacctatgact
gcgaaacgtgtaaccggtatcgtctcgcgtggtggttcaattatcgctaagtggtgcttg
gctcatcatcaagaaagctttctatacacaaacttcagagagatctgtgagatctgtgct
aagtacgatgttgctctatcgttaggtgatggcttgcgtccaggctctgttgctgatgct
aatgatgaagcgcaatttgccgaacttcgcacgctaggcgagttaactaaaattgcttgg
gaatacgatgttcaggtcattattgaaggccctggtcatgtgcctatgcatatgatcaaa
gagaacatggacgagcagcttgaacattgccatgaagcgccgttttatactcttggtcca
ctgacgacagatattgcaccgggatatgaccatataacttcaggcatcggagcggccatg
attggttggtacggatgtgccatgctctgttatgtaacaccaaaagagcatttaggctta
ccaaacaaagaagacgttaaaaccggtctgattacctacaagcttgccgctcatgctggt
gacctagccaaaggccaccccggtgcacaagtacgtgataacgctttgtcaaaagcgcgc
tttgagttccgttgggaagaccaattcaatctatcacttgatcctgaaacggcgcgcgct
tttcatgatgaaaccttgccacaagagtcaggcaaggttgcccatttctgctctatgtgc
ggacctaaattctgttcgatgaagatctcgcaagaggtacgcgaatacgccaaagataca
gagcaggttgcagctgaccaagcgatatcgatcaagatgctggatgatccattagagggt
atgcgtcaaaaatcgcaagagtttcgtgaaacagggtctgagctctatcatccagctgct
actgcagaggtcgccgattaa
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