Vibrio pelagius: LZI70_07310
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Entry
LZI70_07310 CDS
T08558
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vpg
Vibrio pelagius
Pathway
vpg03420
Nucleotide excision repair
vpg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LZI70_07310 (uvrD)
03430 Mismatch repair
LZI70_07310 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpg03400
]
LZI70_07310 (uvrD)
Enzymes [BR:
vpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LZI70_07310 (uvrD)
DNA repair and recombination proteins [BR:
vpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LZI70_07310 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LZI70_07310 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_12
PhoH
Speriolin_C
Motif
Other DBs
NCBI-ProteinID:
UTT83550
LinkDB
All DBs
Position
1:1669471..1671648
Genome browser
AA seq
725 aa
AA seq
DB search
MIDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLQTVEQASPFSIMS
VTFTNKAAAEMRGRIDELMMGSSSGMWNGTFHGICHRVLRAHYLDAKLPEDFQIIDSDDQ
IRLLRRLIKAQNLDEKQWPAKQASWWINGKKDEGLRPSHIDSYNDPVTKTWLKIYAAYQE
ACDRAGLVDFAEILLRCHELLRDKKHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
DCRVMIVGDDDQSIYGWRGAKIENIQKFLDEFPGASTIRLEQNYRSTKTILQASNELISN
NTERMGKELWTDGNDGEPISVYSAYNELDEARFTVSKIKEWQDKGGSLNDTAMLYRNNAQ
SRVLEEALIQGGLPYRIYGGMRFFERQEIKDALSYLRLMSNRNDDAAFERVVNTPTRGMG
DKTLETIRFAARDRGATMWQASIALLEEQVLAGRAAGALSRFIELINALEDDTHEMSLHE
QTDHVIKSSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEAEEMSLLTAFLTHAA
LEAGEGQADEFDDAVQLMTLHSAKGLEFPMVFMVGVEEGMFPSQMSAEDAMRLEEERRLC
YVGMTRAMEKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPASSGRF
GQTAVKENFNETGFSLGSRVKHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAR
LEKLG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgattgatccttcgcttttactcgatggcctcaacgacaagcagcgtgaggcagtggct
gcacccttagaaaatttgctgatcttagcgggagcaggcagtggtaaaacgcgagtgctg
gtgcaccgtatcgcatggctgcaaaccgtagagcaggcatcgccgttttcgattatgtcg
gtaacctttaccaacaaagcggccgctgaaatgcgtggtcgtattgatgagctgatgatg
ggtagctcttcaggtatgtggaacggcacctttcacgggatttgccaccgtgttttacgc
gctcactacttagatgcaaaattaccagaagacttccaaatcattgactctgatgatcag
attcgtctattgcgccgcttgattaaagcgcaaaatctcgatgagaagcagtggccagcg
aaacaggcttcttggtggatcaatggcaagaaagatgaaggcttacgtccaagccatatc
gattcctacaatgacccagtcaccaagacctggcttaagatctatgccgcgtatcaggag
gcgtgtgatcgtgcgggcttggtcgattttgctgagatcttgctgcgttgtcatgaactt
ctgcgtgataagaagcacattcgtgaacactaccaagcgcgtttcaagcatatcttggtc
gacgaatttcaagataccaacaacattcaatacgcatggctgcgcatgatggcaggtcct
gactgtcgagtgatgatcgtcggcgatgatgaccaatcaatctacggctggcgcggtgct
aaaattgagaatatccaaaagttcttagatgagtttccaggtgcctccaccattcgtttg
gaacagaactaccgctctactaagaccattttgcaagcatcgaacgaattgatttcgaat
aataccgagcgtatgggtaaagagctgtggacagatggtaacgatggtgagcctatctcg
gtttattcggcttacaacgagctcgacgaagctcgttttacggtgagcaaaatcaaagag
tggcaagacaagggcggatcattgaatgatacggcgatgctttatcgtaacaacgcccag
tctcgtgtactcgaagaagctttgattcaaggtggattaccttaccgtatctacggcggc
atgcgattcttcgaacgtcaggagatcaaagatgcactgagctatctgcgattgatgtct
aaccgcaatgatgacgcagcctttgaacgtgtggtgaatacgccaacgcgcggtatgggt
gataaaaccttagagaccattcgttttgctgcacgcgatcgtggcgcgacgatgtggcag
gcgagtatcgcacttcttgaagagcaggttttagcgggcagagctgcaggggcattgagc
cgatttatcgagcttatcaacgcactggaagacgatactcacgagatgagcctgcatgaa
cagactgaccacgtgattaagtcgtctggcttgtttgctatgtatgagcaagaaaaaggc
gagaaatcgaaggcacgtattgagaacttggaagagcttgtgacggcgactcgtcaattc
gagaagccggaagaggccgaagagatgagtctgttaacggcattcttgacccacgcagca
ctggaagcgggtgaaggtcaggctgatgagtttgatgatgctgttcaattgatgactctg
cacagtgctaaaggtcttgagttcccaatggtatttatggttggtgtcgaagaaggaatg
ttcccgagccagatgtctgccgaagatgcgatgcgcttggaagaggagcgtcgtctctgt
tacgtcggtatgacgcgtgcgatggaaaagctctatatcacctacgcagaaatgcgtcgc
ctgtatggacaagacaagtaccacaagccatcgcgattcattcgtgaactgcctgaaact
tgtcttgatgaagtacgaatgaaagcacaggtgagtcgcccagcaagcagtggtcgcttt
ggacaaaccgcagtcaaagagaacttcaacgaaactggttttagcttaggttcacgtgtt
aaacaccctaagtttggtgaaggtaccattatcaactttgagggcagtggtccacagagc
cgagttcaggtggccttcaatggtgaagggatcaaatggctggtgactgcttacgctcgt
ttagagaagctaggttaa
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