Vibrio pelagius: LZI70_07335
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Entry
LZI70_07335 CDS
T08558
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vpg
Vibrio pelagius
Pathway
vpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LZI70_07335 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpg03019
]
LZI70_07335 (recQ)
03400 DNA repair and recombination proteins [BR:
vpg03400
]
LZI70_07335 (recQ)
Enzymes [BR:
vpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LZI70_07335 (recQ)
Messenger RNA biogenesis [BR:
vpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LZI70_07335 (recQ)
DNA repair and recombination proteins [BR:
vpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LZI70_07335 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UTT83555
UniProt:
A0ABY5G0S4
LinkDB
All DBs
Position
1:1676958..1678796
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AA seq
612 aa
AA seq
DB search
MTATLIAEQTTSTTISAQSVLEEVFGYQEFRDGQQEVIDMAVSGQDSLVIMPTGGGKSLC
YQIPALVREGLTLVISPLISLMKDQVDQLKANGVAAECINSSMPREELISVFNRMNSGQL
KMVYVSPERVLMRDFIERLQGLPLSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVP
YMALTATADDATRKDIIQRLQLVDPHTYLGSFDRPNIRYNLVEKHKPVSQVVRYLETQRG
NCGIIYCGSRKKVEMVTEKLCNNGIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAF
GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMGWLRRMLDEKD
DGPQKQVETHKLNAMSAFAEAQTCRRQVLLNYFGEYREKPCGNCDICLDPPKHFDATEEA
QKALSCVYRVNQSFGMGYVVEVMRGMQNIRVRDNGHDKLSTYGIGRDHSHDYWISIFRQL
IHKGLLFQNITRNSTLQLTEEARPLLRGEMTLELAVPRLDTAARSAKSDKLSSKNYDKKL
FAKLRKLRKSIADEDGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLDKYADPF
LDLIQEHITNHG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctactttgattgcagaacaaaccaccagtaccaccatcagcgctcaaagcgtg
cttgaggaggtgttcggctatcaagagttcagagatggtcagcaagaggtgatcgatatg
gcggtgtccgggcaagatagcttagtgattatgccaaccggtggtggtaagtcgctctgt
taccagattcccgcgttagtgcgtgaggggctcacattagttatctcgccactgatttcg
ctcatgaaagatcaagtggaccaactcaaggccaatggtgtggcggcggagtgcatcaac
tcctcaatgccacgtgaagagctcatttccgtcttcaatcgcatgaactcaggccaatta
aagatggtctacgtttcacctgagcgcgtattgatgcgtgatttcattgagcgcctgcaa
ggtttaccattatcgatgatcgcggtggatgaagcgcactgtatctcacaatggggtcat
gacttccgcccagaatacgcatcacttggtcagcttaaacagtattttcctcatgtccct
tatatggcattgacggcaaccgccgacgatgcgacacgtaaagacattattcagcgcttg
cagctggtggatcctcacacctacttaggcagctttgaccgtcctaatatccgctataac
ctggtagagaagcacaaaccggtttctcaagtggtgcgttaccttgaaacccagcgcggt
aattgcggcatcatctattgtggtagccgtaagaaagtagagatggttaccgagaagctg
tgtaataacggtattcgtgctgcgggctatcacgctggtatggatacggacgaacgcgct
tatgttcaagaagcgtttcagcgtgatgatattcagatagtcgtagcgaccgtagccttt
ggcatgggtatcaacaaacccaatgttcgttttgtggtgcatttcgacatcccaagaaac
atcgagtcctactatcaagagacgggtagagcagggcgtgatggtctacctgccgaagcg
atgatgctgtacgacccagcagatatgggttggctacgccgtatgttggatgagaaagat
gacggcccgcaaaagcaggtcgaaactcataagcttaatgcgatgagtgccttcgctgag
gcgcaaacctgtcgtcgtcaggtactacttaactattttggtgagtatcgtgaaaagcca
tgtggcaactgcgatatctgccttgatccacccaagcactttgatgcgaccgaagaagcg
caaaaagcgttgtcatgtgtgtatcgagtaaaccagtcctttggtatgggatatgtggtt
gaagtgatgcgcggtatgcagaatatccgcgttcgtgacaatggacatgacaagctttct
acttacggtattggtcgtgaccatagtcatgactactggatcagtatcttccgtcagtta
attcataaagggttgttgttccaaaacatcactcgtaactctacgttgcaactgactgaa
gaagcgcgcccgctgctacgcggagaaatgacactagaattggcagtgccacgtctggat
acggctgcacgtagcgcgaagtcggataaactcagcagtaagaactacgataagaagctg
tttgctaagctacgcaagctacgtaagtcgattgccgatgaagatggcttaccgccttac
gttgtcttcagtgatgccacattgatcgacatggcggaaattttgccaacctcttacggt
gagatgctagcagtgaacggtgttggccagcgtaaacttgataaatatgccgatccgttc
cttgatttgattcaagaacacattactaaccacggttaa
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