Vibrio pelagius: LZI70_07685
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Entry
LZI70_07685 CDS
T08558
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vpg
Vibrio pelagius
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpg03016
]
LZI70_07685 (trmA)
Enzymes [BR:
vpg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
LZI70_07685 (trmA)
Transfer RNA biogenesis [BR:
vpg03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LZI70_07685 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_4
Methyltransf_11
Methyltransf_31
Cons_hypoth95
TRM5-TYW2_MTfase
PrmA
DREV
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
UTT83615
LinkDB
All DBs
Position
1:complement(1751150..1752262)
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AA seq
370 aa
AA seq
DB search
MATLDVNPQRYQEQLTEKTKRLTEMFSRYNVPELEVYESPEQNYRMRAEFRVWHEGDDMY
YVMFNQETKEKYRVDQFPAASRLINDLMPLLMEAMKGNPSLRHKLFQVDFLSTLSGEVLV
SLLYHRQLDEEWIENAKALKQQLNDEGFNLNLIGRARKMKIVLDQDYVIEKLNVNGDSYI
YQQVENSFTQPNGKIAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATEL
AKPSVDSAQYNIAVNNIDNVQIIRMSAEDFTEAMEGKREFRRLKQANVDLKSYNCNTIFV
DPPRSGMDVDTCKMVQGYERIMYISCNPDTLKENLDILSETHNITRFALFDQFPYTHHME
AGVFLERKAK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttagatgtaaacccacaacgctaccaagaacaactaacagaaaagaccaag
cgtctgactgagatgttctcacgatacaatgtgcctgaattggaagtgtatgaatcacca
gaacagaattaccgtatgcgcgcagagttccgcgtgtggcatgaaggtgatgacatgtac
tatgtgatgttcaatcaagaaaccaaagagaagtaccgcgttgatcagtttccagcagca
agccgtcttatcaacgacttaatgccgctactaatggaggcaatgaaaggcaatccttca
ctgcgtcacaaactgttccaagtcgacttcctttcaaccctaagcggtgaagtacttgta
tcactgctataccaccgtcaacttgatgaagagtggattgaaaacgcgaaagcactcaag
caacagctcaatgatgaggggttcaacttaaacctgattggccgtgcgcgtaagatgaag
attgtgctagaccaagactacgtaattgaaaagcttaacgtgaatggtgacagctacatt
taccaacaagtagagaacagcttcacacagcctaacggtaagattgcggagaaaatgctg
gagtgggcggtagactgcactcaagaaagcaaaggcgacctacttgagctgtactgtggt
aacggaaacttctctttagcgctggcacaaaacttcgaacgagtactggcaacagaactg
gctaagccatcggtagactctgcgcaatacaatattgcagtaaacaacatcgataacgtt
cagatcattcgtatgtcggctgaagattttactgaagcgatggaaggtaagcgcgagttc
cgtcgtctaaaacaagctaatgtcgacctaaagagctacaactgcaacacgatctttgtt
gatccaccgcgatcaggcatggatgttgatacatgtaaaatggtacaaggctatgagcgc
atcatgtacatctcttgcaacccagacacactcaaagagaacttggacattctaagcgag
acgcacaacatcacgcgttttgctctgttcgatcagttcccatacactcatcatatggaa
gcaggtgtgttcttagagcgcaaagctaaatag
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