Vibrio pelagius: LZI70_08150
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Entry
LZI70_08150 CDS
T08558
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vpg
Vibrio pelagius
Pathway
vpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LZI70_08150 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpg03400
]
LZI70_08150 (priA)
Enzymes [BR:
vpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LZI70_08150 (priA)
DNA repair and recombination proteins [BR:
vpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LZI70_08150 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
AAA_30
AAA_19
TrwB_AAD_bind
Zn_ribbon_6
TrmB
AAA_11
Zot
PIF1
DUF1258
Motif
Other DBs
NCBI-ProteinID:
UTT83687
UniProt:
A0ABY5G0K6
LinkDB
All DBs
Position
1:complement(1850182..1852383)
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AA seq
733 aa
AA seq
DB search
MRPTIARVALPVPLDKQFDYKIPGHLFPIIGGRVSVPFGRQTLTGIVTALVNESEFEFDK
LKSIKALLDNQPVWPDSVYSLLAWCSQFYQYPLGETFANALPSALRKGKPADFATLVEWQ
ITPQGKDQLMQGFGRAVKQAKVMHLLENGPVPHQEFIDQEISSSVLKTLEEKGWIESREK
KPTRYAWPSDLENDQDKPKLNEEQAIAIATVNSQTEFGCFLLEGVTGSGKTEVYLNMIKP
VLEQGKQALVLVPEIGLTPQTINRFKKRFNVPIEVVHSGLNDSERLNAWLSARDKIAGIV
IGTRSALFTPFADLGIIIVDEEHDASYKQQDSLRYHARDVAIMRAHKAQIPIVLGSATPA
FETLHNAQIGKYGHLTLSSRAGAAVPTTNKVLDVKGEYLESGLSAPLIAEMQRHLKSGNQ
VMLFLNRRGFSPALMCHDCGWTAECKRCDAYYTYHQYSNEMRCHHCGSQQHIVHHCQGCG
SANLVTVGVGTEQLETQLGQLFPEYKTIRIDRDSTRRKGSLESALESIRRGEYQILIGTQ
MLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVILQTHH
PEHGLLQALLHKDYNHFAQTALAERKQAMLPPYTFMTLFRAEANDPHLVEEFLRQVRHTL
ESHPLFDQFCMVLGPTPAPLAKRAGKSRWQLILQTQTRSLMQKLLMSAKPAINMLPLAKK
VRWSLDIEPQDLS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaacaattgcccgagtggctctgccagtccctttagataaacagtttgactac
aaaatcccaggtcatttgtttcctattattggtggacgcgtctcggtcccgtttggtcgt
caaactctgactggtattgtcacggctctggtcaatgagtctgagtttgaatttgacaaa
cttaagtcgattaaggctctactcgacaatcaacctgtatggcctgactcggtctattcc
ttgttagcatggtgcagccagttctatcagtatccattaggtgaaacctttgctaacgcc
ctgccaagcgcattgcgtaaaggtaaacccgcagacttcgcgacactggtcgagtggcaa
atcacaccacaaggtaaagatcagttgatgcaaggctttggacgcgcagtcaaacaagcc
aaagtcatgcacttgcttgaaaatggccctgttccacatcaagagtttattgaccaagag
atctcaagctcggtactcaaaaccctggaagagaaaggctggatagagtctcgcgagaaa
aagccgacccgttatgcatggccaagcgatcttgaaaacgaccaagacaaaccaaagctt
aatgaagagcaggcgatcgcgattgcgacggtgaatagccaaaccgagttcggttgtttc
ctattagaaggtgttactggttcgggcaaaaccgaagtttacttaaatatgattaaaccg
gtgctagaacaaggcaaacaagccctggttctggttccagaaatcggcctgaccccgcaa
accatcaaccgctttaaaaaacgctttaacgtacctattgaagtggtgcactcggggtta
aatgactctgaacgcctaaacgcatggctatctgctcgagataagattgcgggcattgtg
attggcactcgttcggctctatttacgccgtttgctgacctcggcatcattattgtcgac
gaagagcatgacgcgtcatataagcaacaagacagcctgcgttaccatgcgcgtgatgtt
gctatcatgcgcgctcacaaagcacagattcccattgtgcttggctctgcaacgcctgcg
tttgaaactctacacaatgcacaaattggtaagtatggccatctaacgctgagctcacgt
gcaggtgcagccgttccgaccaccaacaaggtgctcgatgttaagggggagtatcttgag
agtggcctttcagcgcctttgattgctgagatgcaaagacatctcaaatccggcaaccag
gtgatgctgttcttaaatcgtcgcggcttctctccagcattgatgtgtcatgactgtggc
tggacggcagagtgtaaacgctgtgacgcctactacacctatcatcaatacagtaatgag
atgcgctgtcaccactgtggctctcagcaacatattgttcatcattgccaagggtgtggc
tcagccaatctggttaccgtaggtgtcggcaccgagcagctcgaaacacaacttggtcaa
ctgttccctgaatacaaaaccatacgtattgaccgtgacagcacccgtcgcaagggcagc
ctagagagtgccttagagtcgattcgccgcggagagtaccagattctgatcggcactcag
atgctggccaaggggcaccactttcccgatgtcactctagtcgcgctgctcgacgtcgat
ggttcgctttatagcagtgactttcgggcctcagaacgcctagctcaactgttcattcaa
gtcgcaggccgtgctggacgagcaagtaagcctggtgaagtgattctgcagactcaccac
ccagaacatgggttgctgcaggcgttgctacataaagattacaaccactttgctcagact
gcgctcgccgagcgtaaacaggcgatgctgccgccctatacttttatgacgctatttcgt
gcggaagccaatgacccacatcttgttgaagagttcttaaggcaggtgcgtcacacctta
gaatcgcacccactgtttgatcagttctgtatggtgcttggccctactccagcgccactg
gctaaacgtgcaggaaaatcacgttggcagttgattttgcaaacccaaactcgctcactt
atgcagaagttactcatgagtgcgaaacctgcgataaatatgttgccactcgcaaaaaag
gtacgttggtcgctcgacatcgagccacaagatctcagttaa
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