Vibrio pelagius: LZI70_08790 Help Entry LZI70_08790       CDS       T08558                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism vpg  Vibrio pelagius Pathway vpg02020   Two-component system vpg02040   Flagellar assembly vpg05111   Biofilm formation - Vibrio cholerae Brite KEGG Orthology (KO) [BR:vpg00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     LZI70_08790  09140 Cellular Processes   09145 Cellular community - prokaryotes    05111 Biofilm formation - Vibrio cholerae     LZI70_08790   09142 Cell motility    02040 Flagellar assembly     LZI70_08790  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vpg03021]     LZI70_08790 Transcription machinery [BR:vpg03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      LZI70_08790 SSDB OrthologParalogGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21 Motif Other DBs NCBI-ProteinID:  UTT83810 UniProt:  A0ABY5G1I6 LinkDB All DBs Position 1:complement(1971379..1972845) Genome browser AA seq 488 aa AA seqDB search MKPSLQLKLGQQLAMTPQLQQAIRLLQLSTLDLQQEIQEALESNPLLDVEEGNDDAPTNS EEKPSRDEKETAEATAEPDLPDSSDLIEKSEIGNDLEIDTTWEDVYSANTGNTGIAIDDD MPVYQGETTQSLQDYLLWQLDLTPFSETDRTIALALIDAIDDYGYLTVSSEEILESFDNE EIELDEIEAVRKRIQQFDPLGVGSLNLQDCLLLQLATFPEDTPWLTEAKLVLTSHIDQLG NRDYKLIIKETKLKEAELREVLQLIQQLDPRPGSKITPDETEYVVPDVSVFKDLGKWLVT INPDSVPKLKVNQQYADLGSKGNSADNQYIRSNLQEAKWLIKSLESRNETLLKVARCIVE HQHDFFEHGEEAMKPMVLNDVALAVDMHESTISRVTTQKFMHTPRGIFELKYFFSSHVST DNGGECSSTAIRALIKKLVAAENTAKPLSDSKIAALLADQGIQVARRTIAKYRESLGIAP SSQRKRLL NT seq 1467 nt NT seq  +upstreamnt  +downstreamnt atgaaaccctcattacaacttaagctaggccagcaattagcaatgaccccacagctacaa caagcgatccgtttgttgcagttgtctacgttggatttgcaacaagagattcaagaggct ttggaatcaaacccacttctcgacgtagaagaggggaatgatgacgcccctacaaactct gaagaaaaacctagccgtgacgagaaagaaacagcagaggccactgctgaaccagactta cctgacagttccgatctgattgaaaagtcagaaattggcaacgacttagaaatcgatact acttgggaagatgtgtacagtgctaacactggtaatactggtattgcgatcgacgatgat atgccggtttaccaaggtgagacaacacaaagcctgcaagattacctattgtggcaatta gaccttacgccattttcagaaactgaccgtactattgcattagcgttaattgatgcaatt gacgactacggctacctgactgtttcgagtgaagagatccttgaaagcttcgacaacgaa gagattgaactcgacgagattgaagccgttcgaaaacgtattcaacagttcgatccactc ggcgtgggctcgctgaacttacaagactgtttgctacttcaactggcgacattccctgaa gatactccgtggctgacagaggcaaagttagtacttactagccacatcgaccaattaggc aatcgtgattacaaactgatcatcaaagaaaccaagcttaaagaagcagagctacgtgaa gttctgcagcttatacagcaactagacccgcgaccaggcagcaaaattaccccggatgaa accgagtatgttgtccctgatgtatcggtgtttaaagatctaggtaagtggttagtcacc atcaacccagatagcgtaccaaagctgaaagtgaaccagcagtacgccgacttaggcagt aaaggcaatagtgctgacaaccaatacattcgctccaacttgcaagaggcaaaatggcta attaaaagcctagagagccgaaatgagaccctactcaaagttgcgcgatgcattgttgaa catcagcacgatttcttcgaacatggtgaagaagccatgaagcctatggtgttgaatgac gtcgctcttgcagtcgacatgcatgaatccacaatttctcgtgttacgacacagaagttc atgcacacaccacgaggcatctttgagctgaaatacttcttctctagtcatgtcagcaca gacaacggcggagagtgttcatcaacagcaattcgtgcgctgattaagaaactggtggct gctgaaaacacagcgaaaccactcagcgacagcaagattgctgctttactggctgaccaa ggaattcaagtagctagaagaaccatagcaaaataccgtgaatctttaggcattgcccct tcgagtcagcgtaaacgcctgctatag

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