Vibrio pelagius: LZI70_09700
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Entry
LZI70_09700 CDS
T08558
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vpg
Vibrio pelagius
Pathway
vpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LZI70_09700 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpg03019
]
LZI70_09700 (pcnB)
Enzymes [BR:
vpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LZI70_09700 (pcnB)
Messenger RNA biogenesis [BR:
vpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LZI70_09700 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Isd_H_B_linker
Motif
Other DBs
NCBI-ProteinID:
UTT83956
LinkDB
All DBs
Position
1:complement(2138747..2140102)
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AA seq
451 aa
AA seq
DB search
MNTNDNTPSEQRGFHDLALNIYTRQEHNISRKQISDNALKVLYRLNGAGFDAFLVGGGVR
DLLLGSQPKDFDIATNATPEQIKNLFRNCRLIGRRFRLAHIMFGRDIIEVATFRGHHQEP
SKNVSAQSKEGMLLRDNVYGSVDEDAERRDFTINAMYYNIADYSIHDYAGGVEDLEDRLI
RLIGDPETRYREDPVRMLRAMRFSAKLDFDIEEDTADPIEELAHLLKDIPAARLYEESLK
LLQSGYGLETYHLMREYNLFQQMFPAVAEFFTEDYSSQTEQMLDLVLDSTDLRIEDGKRV
NPAFMFAAILWYPMNKLAEKLADELGLSQYDAIMEASNVILDQQVKSIAIPRRHTATIRE
VWQLQLRLPRRNGKRAQRLMELNKFRAGFDFLEMRGEIEGGETQELAKWWERYQSAGRNM
RQAMANDVAPPSKSGHRRRKTYRNKKSKPSS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaacgacaatacccctagcgaacaacgtggattccacgatttagctctgaat
atttacactcgacaagagcacaatatttcacgcaagcagatcagtgataacgcactcaaa
gtgttatatcgcctgaatggtgcgggttttgacgcattcctagtcggtggtggtgtgcga
gatttactgctcggctcacaaccgaaagatttcgacatcgcgactaacgcgacgccagaa
cagatcaaaaacctattcagaaactgccgtcttatcggtcgtcgcttccgccttgcgcac
atcatgtttggtcgtgacatcatcgaagtcgccaccttccgtggtcaccaccaagaacca
tcgaaaaacgtatcagctcagtctaaagaaggcatgttgctgcgtgataacgtctacggc
agcgtagatgaagatgcagagcgtcgtgacttcaccatcaatgcgatgtactacaacatt
gcagactacagcatccacgattacgctggtggtgtagaagacttagaggatcgattgatc
cgcctgattggtgatccagaaactcgctaccgtgaagacccggtgcgtatgcttcgtgca
atgcgcttctctgcgaaactagactttgacatcgaagaagacacggctgatccaattgaa
gagttggcacacctgctaaaagatatcccagcggcccgtctctatgaagagtcactaaag
cttcttcaatcaggctacggtcttgagacttaccacctaatgcgcgagtacaatctgttc
caacagatgttcccagcggtggctgagttctttactgaagactactcttctcagacagaa
cagatgctagacttggtgctcgattctactgacctacgtatcgaagatggaaaacgcgtt
aacccagcctttatgttcgcggccatcttgtggtacccgatgaacaaactggcagagaag
ctggccgatgagcttggtctttctcaatatgacgctatcatggaagcgagcaatgttatt
cttgatcaacaagttaagagcatcgctattccacgtcgtcacacagcgacgattcgtgaa
gtatggcaactgcaacttcgcctacctcgtcgcaacggcaagcgcgctcaacgcctaatg
gagctcaacaagttccgtgctggctttgacttccttgagatgcgcggcgagatcgaaggt
ggtgaaacccaagagcttgctaaatggtgggagcgctaccaaagcgcaggacgcaacatg
cgtcaagcgatggcaaacgatgtagcgccaccatcaaaatcaggtcatcgacgccgtaag
acttaccgcaacaagaaaagtaagccgtcatcatga
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