Vibrio pelagius: LZI70_09990
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Entry
LZI70_09990 CDS
T08558
Name
(GenBank) EAL domain-containing protein
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vpg
Vibrio pelagius
Pathway
vpg05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
LZI70_09990
Enzymes [BR:
vpg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LZI70_09990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_4
PAS_9
PAS_8
Motif
Other DBs
NCBI-ProteinID:
UTT84009
LinkDB
All DBs
Position
1:complement(2217070..2219109)
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AA seq
679 aa
AA seq
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MPPQQLQHWFSQLTANSPFFFAILDAQHNYFIVNERYCDIAGLDQSELTGMNDRQTLGEQ
FYQHLKPYYERAFKGESIEAEITLNETDLDTSLHFSLAPLSNGKDTDYIVFHAFDTSENQ
VLVRSLEESEAKFHKLTHLLPDGLLLVEDDFILSSNPAAARLLGFNSPSELLGEELGRLF
IDEQTKTVFNNKLSSIVSESGLVCLTGARCGFERKVQLHIDSTALLGSTTQLVLIQDAQE
APKTLTTNINEDAYIDDLTKLYNRVGFTKRLEQFIHNETPVVMLYLDIDNFKNINDSLGH
HIGDKVIKEVASRLKRLLPRRAVVGHLGGDEFGIILPEPENKKTVETLAEKIIALINQPF
DLHHFSKRLACSIGSVNFPQDGTDARILLQNADTAMYEAKDRGRNRLIKFNEQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFTINGAEALVRWKHPVEGYISPAAFIPVAER
AGLIEQLGRVVMREVFATVKRWKIQGILPGRVAINLSPEQFGNPKLIDYMEKLLRTTELD
PSAITFELTESAVMSDSEHTLQMLNAIKKLGFALSIDDFGTGYSSLSYLARFPIDELKID
RAFITDIDTLPKQVTVIENIINLGKSLNLTVVAEGVETSEQATLLSNLNCSSIQGFHFYR
PQPKQEVEELFAQNRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccagcaactacaacattggttttcacagctcacagcaaatagccctttcttt
tttgctattcttgatgctcagcataactattttatagttaatgagcgttactgtgatatt
gcggggttagaccaatcagagttaacagggatgaacgaccgccaaacccttggtgaacag
ttctaccaacaccttaaaccatattacgaacgcgcctttaagggtgagtccattgaggct
gaaattacgctcaacgaaaccgacctcgataccagccttcactttagcctagcacctctg
tctaacggaaaagacaccgattacattgtttttcacgcctttgacacatcagaaaatcaa
gtacttgtccgttcactcgaagagtctgaagccaagttccataagctaacccacttgttg
cctgacggtcttcttcttgtcgaagatgatttcattctctcttctaacccagcggctgct
cgcttgctcggcttcaactctccatcagagctgctcggcgaagagctaggacgcctattc
attgatgagcaaaccaaaacagtcttcaacaataagctgagctctattgtttctgagtct
ggtttggtgtgcttaactggcgcgcgctgtgggtttgaacgcaaggttcagttgcatatt
gattcaactgcgctattgggtagtactacccaattagtcttgattcaagatgcgcaagaa
gcaccgaaaacgctcactaccaacataaatgaagatgcctacattgacgacctgactaag
ttgtataaccgtgttggtttcactaagcgattagagcagtttattcataatgagacacca
gtggtgatgttgtacttagacattgataactttaaaaatatcaatgactcactcggtcat
cacattggtgataaggtgataaaagaggtcgcatctcgacttaaacgcctgctgccaagg
cgcgctgttgtcggccatttagggggggatgaatttggtatcattctgccggagccggag
aacaaaaagaccgttgaaactctagccgaaaagatcattgctctaatcaaccagccgttc
gatcttcaccattttagcaaacgcttagcttgctctatcggtagcgtcaacttccctcaa
gatggcaccgatgcgcgtatcttgctacaaaatgccgataccgcaatgtatgaagccaaa
gaccgaggtcgtaatcgcctgattaagttcaatgagcagatgaacaaagaggctcgtatg
cgtctctggcttgaaatcgaacttcagaaagcactgcagcaaaacggtctggaggtttgg
tatcaacctaaggtcaacgcccgtgactttaccatcaatggtgcagaagccttggtacgt
tggaagcaccccgtcgaaggctacatcagtcctgccgcgtttatccctgtggctgagcgt
gctggcttgattgaacaactaggccgagtggtgatgcgcgaggtgtttgcaacagttaag
cgttggaagatccaagggatcttaccaggacgtgttgcgatcaacctttcgccggagcaa
tttggtaatcctaaactgatcgactacatggaaaagctgctgcgaacgacagagctagac
ccaagcgccatcacctttgagctgaccgaaagtgcggtgatgagtgacagcgaacacaca
cttcaaatgctcaacgccattaaaaaacttggctttgccctctcgattgatgactttgga
acaggttactcttcactttcgtatttggctcgcttccctatcgacgagttaaaaatagac
cgcgcctttatcaccgacattgacactctaccaaagcaagtcacagtgatagagaacatc
atcaacctcggtaagtctctcaacctaacagtggttgctgaaggtgttgaaactagcgag
caagcgacactcctatcaaatcttaactgtagctcaattcagggcttccacttctaccga
cctcagccaaaacaggaagttgaagagctgtttgcccagaaccgccgccataaaaattaa
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