Vibrio pelagius: LZI70_10080
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Entry
LZI70_10080 CDS
T08558
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vpg
Vibrio pelagius
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpg03400
]
LZI70_10080 (radA)
DNA repair and recombination proteins [BR:
vpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LZI70_10080 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
GvpD_P-loop
Rad51
SLFN-g3_helicase
AAA_22
AAA
RecA
AAA_14
ABC_tran
NTPase_1
AAA_16
AAA_29
AAA_24
Viral_helicase1
Zn_ribbon_Thio2
Zeta_toxin
AAA_5
nSTAND3
Zn_ribbon_8
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UTT84026
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All DBs
Position
1:2238156..2239535
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AA seq
459 aa
AA seq
DB search
MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRLAASPQVARNERLTGYAGSATES
SVQTLSEIDLQEVPRFSSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCLLSS
QLPTLYVTGEESLQQVAMRASRLGLPKDHLKMLSETNVDKICQVAEKEQPKIMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRFAKQNNVAIFLVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRALPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAISAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcaaaacgagcttatgtatgtaatgactgtggcgcagactttccgcgctgg
caggggcaatgtaatgcatgcggagcttggaacacaatcacagaggtaaggctcgctgca
tcacctcaagttgcacgtaatgagagactcaccggttacgcaggcagcgcaacggaatcg
agtgttcaaaccctttcagagatcgatctgcaagaagtaccgagatttagtagtggcttt
aaagagctcgatcgcgttcttggcggcggtgtggttcctggtgctgcgattcttatcggt
ggtaacccaggagctggtaagtcgacgctactgttacagacgatgtgtctactctcttca
cagcttcccactttatatgtgacaggtgaggaatcgttgcagcaggtggcgatgcgcgcc
tcgcgtttaggcttgccgaaagatcatctcaaaatgttgtctgaaaccaatgtcgataag
atctgtcaggtagcagaaaaagagcaaccgaagatcatggttatagactcgattcaagtt
atgcatgtcgccgatgttcagtcatcgccaggcagtgtggctcaggtacgtgagtcagca
accgcactgactcgctttgccaagcagaataatgtcgctattttccttgttggtcacgta
actaaagatggcacgctggcaggccctaaagtgctagagcatattattgactgctcggtg
ctgcttgatggcggtactgatagtcgttttagaacgctgcgcagccataaaaaccgtttt
ggtgcggtaaatgagcttggtgtgtttgcaatgacggggcaagggcttaaagaagtctcg
aacccttcggctattttcctttctcgtggtgaagaagaaacctcgggaagctcagtgatg
gtggtttgggaaggtacgcgtccacttctcgtcgagattcaagctctggtggattattca
cagttggcgaaccctcgtcgtgtcgctgtaggcttagagcaaaaccgcctctctttatta
ctcgccgtgctgcataaacatggcggactgcaaatggccgaccaagatgtgtttgtgaat
gtcgtcggtggtgttaaagtaaccgaaaccagtgctgacctagcattagtgatggcactg
ttgtctagttttagagacagagcactacctaaagatgtggtcgtgtttggtgaagtcggt
ttggccggggagattaggccggttccaagtggacaagagcgtctaaacgaagccttcaag
catggctttaaaaaagcgatcgtgccggcggccaacatgcccaagggtggtattccaggg
atgcaaatccacggggtgaaaaaattgtcagaagcaattagtgcttttgatgagttgtaa
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