Vibrio pelagius: LZI70_10680
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Entry
LZI70_10680 CDS
T08558
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vpg
Vibrio pelagius
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpg01011
]
LZI70_10680
Enzymes [BR:
vpg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LZI70_10680
Peptidoglycan biosynthesis and degradation proteins [BR:
vpg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LZI70_10680
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM1_NFP_LYK
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
UTT84142
LinkDB
All DBs
Position
1:complement(2360079..2361653)
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AA seq
524 aa
AA seq
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MRVKYSWALVLLLSGCQLTQPDNQDQASEQTNISPAKEISQPEVSISKAEKEQPKVEAPV
VTPQTQQDVWKRIAMQLEMDVPNHKKVDYYRTWYLKHPNHLKTVSKRAEPFLYLITEKIE
EKGLPLELALLPVVESSFDAFAYSHGSAAGLWQFIPGTGKYYGLEQNFWYDGRRDVAAST
DAALEYLESLNKRFDGDWSHAIAAYNSGGGRVNSAIRKNKKLGKPIDFFSLDLPKETSSY
VPKLLALADVIANQEKYGIDIPPIANKPVLKLVNPEEQLDLAIAANYAGIPVKELQSYNP
AYNQWATAPEKHQQLLLPIHSVEQFNKKVAANKGKGMKLVRYKVKSGDSISVLAQRYNTT
SKVIRSANGMSNNNIRVGQHLMIPSSTKDDKAYALSASNRLASTQSKSRGQYKLTHTVKS
GESLWTIARANKVSHQSLAKWNGMGPRDTLRVGQNLVVWKNSADGAIIRAVYYNVKSGDT
VSGIASKFKVKTSDVVKWNTLQNKKYLQPGQKLKLYVDVTKVSV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttaagtacagctgggctttggtattactactttctggttgccaattaactcag
ccagataatcaagaccaagcttccgagcaaaccaacatctcccctgcgaaagaaatttct
caaccagaagtttcaatatcaaaagcagaaaaagaacaacctaaagttgaagcacccgtc
gttaccccacaaacacaacaagatgtttggaaacgcattgcaatgcaacttgaaatggat
gtacccaaccacaaaaaagtcgactattaccgcacttggtatttgaagcatcctaaccat
ctaaaaaccgtatcaaaacgagcagaacctttcctttatttgatcactgaaaagatcgaa
gagaagggtctaccgcttgagctcgctttactccctgtcgtagagagctcatttgatgcg
tttgcctactcccatggtagtgctgcaggtttgtggcaattcatcccaggtactggcaaa
tactatggtcttgaacagaacttctggtacgacggacgtcgtgatgttgcagcgtcaacc
gatgctgctcttgagtaccttgagtcactaaataagcgctttgacggtgattggagtcac
gctatcgcggcttataatagtggtggtggccgcgtaaacagcgcgattcgtaagaacaaa
aagttgggtaagccgatagactttttctctcttgacctcccaaaagagaccagcagctat
gtcccaaaactgctggctctagcggacgtgattgctaaccaagaaaagtacggcatcgat
attccacctattgccaacaaacccgttcttaaactggtgaatcctgaagagcagcttgac
ctagcgattgcggctaattacgcaggtatcccagtaaaagagctacaaagctacaaccca
gcttacaaccagtgggccactgcgccagagaagcaccaacagctccttcttccaatccat
tcggttgaacagttcaataaaaaagtggctgcgaacaaaggcaaaggcatgaagctggtg
cgctataaggtgaaatctggtgatagcatcagcgtacttgctcagcgttacaacaccacc
agcaaagtcattcgcagcgctaatggtatgtccaacaacaacattcgcgttggtcagcat
ctgatgattccttcatcaactaaagatgataaagcgtacgctctgagtgcctctaaccgc
ttagcgagcacacagtcgaaaagtcgcggtcagtataagctgacccacacagtaaaaagt
ggcgagagtctatggacaattgcacgtgccaataaggtctctcatcagtctcttgctaaa
tggaacggcatggggcctcgagacacgctgcgagttggtcaaaatctggtcgtttggaaa
aacagcgccgatggtgcaatcatcagagccgtctactacaacgtaaaatcaggtgacaca
gtcagcggtattgcatcaaagttcaaagtaaaaacttcggatgttgtaaaatggaacact
ttgcaaaacaagaagtacttacagccaggccagaagcttaagctgtatgttgatgtaact
aaggtaagtgtatga
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