Vibrio pelagius: LZI70_11380
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Entry
LZI70_11380 CDS
T08558
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vpg
Vibrio pelagius
Pathway
vpg05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
LZI70_11380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpg03000
]
LZI70_11380
Transcription factors [BR:
vpg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LZI70_11380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
UTT84273
UniProt:
A0ABY5G2B5
LinkDB
All DBs
Position
1:complement(2511236..2512111)
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSLNLRLLNRHARKLSLTEA
GERFFNECSPLLQRLASTAEELTDVCKGASGKIRISAPSNLTKRMMMPMFSDFMSQYPDI
NIELMMNNQADQLDPTEWDVIFRVGPQRDSSLIARKISEVKDILVASPDYLAKNPAPTHA
EELANHSLLKGYPLIKWQLSNSNDESVVNTEKGRFNANALNVVRQACSEGLGITLMPDVM
IREYIEDGSLVRVLDDWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYHIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgatttaaacctgtttcgattagtcgtcgaaaatgggagctacaccgca
acctcgcgcaaaactatgattccggttgcgacgatcacacgacgtattcaagctttggaa
gactctctaaatctgaggcttctaaacagacatgcgcgtaaactttcattgacagaggct
ggagagcgttttttcaatgagtgctcaccgttactacagcgtttggcatcaacggccgaa
gaattaacagatgtctgcaagggcgcatcaggtaagatccgtatttccgcaccatcaaac
ctaaccaagcgtatgatgatgccaatgttcagcgacttcatgagccaatacccagatatc
aacattgagcttatgatgaacaaccaagctgaccaactcgacccgaccgaatgggacgtt
atttttcgtgttggcccacagcgagactcaagccttattgctcgtaagatcagcgaagtt
aaggacatactcgtagcaagtcctgattatttagcgaaaaacccagcccctacccatgca
gaagagctggctaatcactcacttctcaaaggttaccctttaatcaaatggcagctaagc
aactccaacgacgaaagtgtggtaaacacagaaaaaggtcgtttcaatgctaatgcgtta
aacgtagtaagacaggcatgttcagaaggcttaggcatcactctaatgccagatgttatg
atccgtgagtacattgaagatggcagtttagtgcgggtgttagatgattggagtgctaac
ccgagagacatttacatgctctacaatcacaaagatcacctgccagaaaaagtacgtcta
tttatcgattttgtgatcgcataccacatccactaa
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